Artículo

Este artículo es de Acceso Abierto y puede ser descargado en su versión final desde nuestro repositorio
Consulte el artículo en la página del editor
Consulte la política de Acceso Abierto del editor

Abstract:

Tyrant flycatchers (Aves: Tyrannidae) are endemic to the New World, and many species of this group are threatened or near-threatened at the global level. The aim of this study was to test the 18 microsatellite markers that have been published for other Tyrant flycatchers in the Strange-tailed Tyrant (Alectrurus risora) and the Sharp-tailed Tyrant (Culicivora caudacuta), two endemic species of southern South American grasslands that are classified as vulnerable. We also analyzed the usefulness of loci in relation to phylogenetic distance to the source species. Amplification success was high in both species (77 to 83%) and did not differ between the more closely and more distantly related species to the source species. Polymorphism success was also similar for both species, with 9 and 8 loci being polymorphic, respectively. An increased phylogenetic distance thus does not gradually lead to allelic or locus dropouts, implying that in Tyrant flycatchers, the published loci are useful independent of species relatedness. © FUNPEC-RP.

Registro:

Documento: Artículo
Título:Microsatellite usefulness is independent of phylogenetic distance in Tyrant flycatchers (Aves: Tyrannidae): A test using two globally threatened species
Autor:Mahler, B.; Schneider, A.R.R.; Di Giacomo, A.S.; Di Giacomo, A.G.; Reboreda, J.C.; Tiedemann, R.
Filiación:Departamento de Ecología, Genética y Evolución, Universidad de Buenos Aires, Pabellón II Ciudad Universitaria, Buenos Aires, Argentina
Unit of Evolutionary Biology/Systematic Zoology, Institute of Biochemistry and Biology, University of Potsdam, Potsdam-Golm, Germany
Departamento de Conservación, Aves Argentinas/Asociación Ornitológica del Plata, Buenos Aires, Argentina
Palabras clave:Alectrurus risora; Culicivora caudacuta; Microsatellites; Tyrannidae; Alectrurus risora; allele; article; bird; controlled study; Culicivora caudacuta; endangered species; endemic species; gene amplification; gene locus; genetic polymorphism; grassland; microsatellite marker; nonhuman; phylogeny; South America; Animals; DNA, Mitochondrial; Endangered Species; Evolution, Molecular; Microsatellite Repeats; Passeriformes; Phylogeny; Polymorphism, Genetic
Año:2013
Volumen:12
Número:3
Página de inicio:2966
Página de fin:2972
DOI: http://dx.doi.org/10.4238/2013.August.12.12
Título revista:Genetics and Molecular Research
Título revista abreviado:Genet. Mol. Res.
ISSN:16765680
PDF:https://bibliotecadigital.exactas.uba.ar/download/paper/paper_16765680_v12_n3_p2966_Mahler.pdf
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_16765680_v12_n3_p2966_Mahler

Referencias:

  • Beheler, A.S., Fike, J.A., Rhodes Jr., O.E., Eight new polymorphic microsatellite loci from the eastern phoebe (Sayornis phoebe) (2007) Conserv. Genet, 8, pp. 1259-1261
  • (2009) IUCN Red List For Birds, , http://www.birdlife.org, Bird Conservation International, Available at, Accessed July 20, 2012
  • Carreras-Carbonell, J., Macpherson, E., Pascual, M., Utility of pairwise mtDNA genetic distances for predicting cross-species microsatellite amplification and polymorphism success in fishes (2008) Conserv. Genet, 9, pp. 181-190
  • Dawson, D.A., Hunter, F.M., Pandhal, J., Buckland, R., Assessment of 17 new whiskered auklet (Aethia pygmaea) microsatellite loci in 42 seabirds identifies 5-15 polymorphic markers for each of nine Alcinae species (2005) Mol. Ecol. Notes, 5, pp. 289-297
  • Devenish, C., Díaz fernández, D.F., Clay, R.P., Davidson, I., (2009) Important Bird Areas Americas: Priority Sites For Biodiversity Conservation, , BirdLife Conservation Series No. 16. BirdLife International, Quito
  • Fitzpatrick, J.W., Family Tyrannidae (Tyrant-flycatchers) (2004) Handbook of the Birds of the World, 9, pp. 170-462. , del Hoyo J, Elliot A, Christie DA, Lynx Edicions, Barcelona,Cotingas to Pipits and Wagtails
  • Galbusera, P., van Dongen, S., Matthysen, E., Cross-species amplification of microsatellite primers in passerine birds (2000) Cons. Genet, 1, pp. 163-168
  • Housley, D.J., Zalewski, Z.A., Beckett, S.E., Venta, P.J., Design factors that influence PCR amplification success of cross-species primers among 1147 mammalian primer pairs (2006) BMC Genomics, 7, p. 253
  • Hughes, C.R., Kavlie, R., Johnson, K., Characterization of polymorphic trinucleotide microsatellite loci in the greattailed grackle, Quiscalus mexicanus (1998) Mol. Ecol, 7, pp. 783-784
  • Karaiskou, N., Buggiotti, L., Leder, E., Primmer, C.R., High degree of transferability of 86 newly developed zebra finch EST-linked microsatellite markers in 8 bird species (2008) J. Hered, 99, pp. 688-693
  • Klein, A., Horsburgh, G.J., Küpper, C., Major, A., Microsatellite markers characterized in the barn owl (Tyto alba) and of high utility in other owls (Strigiformes: AVES) (2009) Mol. Ecol. Resour, 9, pp. 1512-1519
  • Küpper, C., Burke, T., Székely, T., Dawson, D.A., Enhanced cross-species utility of conserved microsatellite markers in shorebirds (2008) BMC Genomics, 9, p. 502
  • Ohlson, J.I., Fjeldså, J., Ericson, P.G.P., Tyrant flycatchers coming out in the open: Phylogeny and ecological radiation of Tyrannidae (Aves, Passeriformes) (2008) Zool. Scripta, 37, pp. 315-335
  • Peakall, R., Smouse, P.E., GENALEX 6: Genetic analysis in Excel. Population genetic software for teaching and research (2006) Mol. Ecol. Notes, 6, pp. 288-295
  • Primmer, C.R., Painter, J.N., Koskinen, M.T., Palo, J.U., Factors affecting avian cross-species microsatellite amplification (2005) J. Avian Biol, 36, pp. 348-360
  • Primmer, C.R., Moller, A.P., Ellegren, H., A wide-range survey of cross-species microsatellite amplification in birds (1996) Mol. Ecol, 5, pp. 365-378
  • Rousset, F., Genepop'007: A complete reimplementation of the Genepop software for Windows and Linux (2008) Mol. Ecol. Resour, 8, pp. 103-106
  • Tarof, S.A., Ratcliffe, L.M., Boag, P.T., Polymorphic microsatellite loci for assigning parentage in least flycatchers (Empidonax minimus) (2001) Mol. Ecol. Notes, 1, pp. 146-148
  • Tello, J.G., Moyle, R.G., Marchese, D.J., Cracraft, J., Phylogeny and phylogenetic classification of the tyrant flycatchers, cotingas, manakins, and their allies (Aves: Tyrannides) (2009) Cladistics, 25, pp. 429-467
  • Watson, C.J.W., Beheler, A.S., Rhodes Jr., O.E., Development of hypervariable microsatellite loci for use in eastern phoebes (Sayornis phoebe) and related Tyrannids (2002) Mol. Ecol. Notes, 2, pp. 117-118

Citas:

---------- APA ----------
Mahler, B., Schneider, A.R.R., Di Giacomo, A.S., Di Giacomo, A.G., Reboreda, J.C. & Tiedemann, R. (2013) . Microsatellite usefulness is independent of phylogenetic distance in Tyrant flycatchers (Aves: Tyrannidae): A test using two globally threatened species. Genetics and Molecular Research, 12(3), 2966-2972.
http://dx.doi.org/10.4238/2013.August.12.12
---------- CHICAGO ----------
Mahler, B., Schneider, A.R.R., Di Giacomo, A.S., Di Giacomo, A.G., Reboreda, J.C., Tiedemann, R. "Microsatellite usefulness is independent of phylogenetic distance in Tyrant flycatchers (Aves: Tyrannidae): A test using two globally threatened species" . Genetics and Molecular Research 12, no. 3 (2013) : 2966-2972.
http://dx.doi.org/10.4238/2013.August.12.12
---------- MLA ----------
Mahler, B., Schneider, A.R.R., Di Giacomo, A.S., Di Giacomo, A.G., Reboreda, J.C., Tiedemann, R. "Microsatellite usefulness is independent of phylogenetic distance in Tyrant flycatchers (Aves: Tyrannidae): A test using two globally threatened species" . Genetics and Molecular Research, vol. 12, no. 3, 2013, pp. 2966-2972.
http://dx.doi.org/10.4238/2013.August.12.12
---------- VANCOUVER ----------
Mahler, B., Schneider, A.R.R., Di Giacomo, A.S., Di Giacomo, A.G., Reboreda, J.C., Tiedemann, R. Microsatellite usefulness is independent of phylogenetic distance in Tyrant flycatchers (Aves: Tyrannidae): A test using two globally threatened species. Genet. Mol. Res. 2013;12(3):2966-2972.
http://dx.doi.org/10.4238/2013.August.12.12