Registro:

Referencias:

• Adler, N.R., Mahony, A., Friedman, N.D., Diphtheria: forgotten, but not gone (2013) Intern. Med. J, 43, pp. 206-210
• Alcaraz, N., Friedrich, T., Kotzing, T., Krohmer, A., Muller, J., Pauling, J., Efficient key pathway mining: combining networks and OMICS data (2012) Integr. Biol, 4, pp. 756-764
• Asif, S.M., Asad, A., Faizan, A., Anjali, M.S., Arvind, A., Neelesh, K., Dataset of potential targets for Mycobacterium tuberculosis H37Rv through comparative genome analysis (2009) Bioinformation, 4, pp. 245-248
• Barh, D., Gupta, K., Jain, N., Khatri, G., Leon-Sicairos, N., Canizalez-Roman, A., Conserved host-pathogen PPIs. Globally conserved inter-species bacterial PPIs based conserved host-pathogen interactome derived novel target in C. pseudotuberculosis, C. diphtheriae, M. tuberculosis, C. ulcerans, Y. pestis, and E. coli targeted by Piper betel compounds (2013) Integr. Biol, 5, pp. 495-509
• Barh, D., Jain, N., Tiwari, S., Parida, B.P., D'Afonseca, V., Li, L., A novel comparative genomics analysis for common drug and vaccine targets in Corynebacterium pseudotuberculosis and other CMN group of human pathogens (2011) Chem. Biol. Drug Des, 78, pp. 73-84
• Barh, D., Kumar, A., In silico identification of candidate drug and vaccine targets from various pathways in Neisseria gonorrhoeae (2009) In Silico Biol, 9, pp. 225-231
• Barraud, O., Badell, E., Denis, F., Guiso, N., Ploy, M.C., Antimicrobial drug resistance in Corynebacterium diphtheriae mitis (2011) Emerg. Infect. Dis, 17, pp. 2078-2080
• Baumbach, J., On the power and limits of evolutionary conservation-unraveling bacterial gene regulatory networks (2010) Nucleic Acids Res, 38, pp. 7877-7884
• Baumbach, J., Apeltsin, L., Linking cytoscape and the corynebacterial reference database CoryneRegNet (2008) BMC Genomics, 9, p. 184
• Benkert, P., Kunzli, M., Schwede, T., QMEAN server for protein model quality estimation (2009) Nucleic Acids Res, 37, pp. W510-W514
• Berman, H., Henrick, K., Nakamura, H., Announcing the worldwide protein data bank (2003) Nat. Struct. Biol, 10, p. 980
• Brooks, G.F., Carroll, K.C., Butel, J.S., Morse, S.A., Mietzneron, T.A., "Aerobic non-spore-forming gram-positive bacilli: Corynebacterium, Listeria, Erysipelothrix, Actinomycetes, and related pathogens," (2010) In Jawetz, Melnick, & Adelberg's Medical Microbiology, , 25 Edn, (New York, NY: McGraw-Hill)
• Cerdeno-Tarraga, A.M., Efstratiou, A., Dover, L.G., Holden, M.T., Pallen, M., Bentley, S.D., The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129 (2003) Nucleic Acids Res, 31, pp. 6516-6523
• Chong, C.E., Lim, B.S., Nathan, S., Mohamed, R., In silico analysis of Burkholderia pseudomallei genome sequence for potential drug targets (2006) In Silico Biol, 6, pp. 341-346
• Davies, C., Ramakrishnan, V., White, S.W., Structural evidence for specific S8-RNA and S8-protein interactions within the 30S ribosomal subunit: ribosomal protein S8 from Bacillus stearothermophilus at 1.9 A resolution (1996) Structure, 4, pp. 1093-1104
• Dutta, A., Singh, S.K., Ghosh, P., Mukherjee, R., Mitter, S., Bandyopadhyay, D., In silico identification of potential therapeutic targets in the human pathogen Helicobacter pylori (2006) In Silico Biol, 6, pp. 43-47
• Finn, R.D., Coggill, P., Eberhardt, R.Y., Eddy, S.R., Mistry, J., Mitchell, A.L., The Pfam protein families database: towards a more sustainable future (2016) Nucleic Acids Res, 44, pp. D279-D285
• Furnham, N., Holliday, G.L., de Beer, T.A., Jacobsen, J.O., Pearson, W.R., Thornton, J.M., The catalytic site atlas 2.0: cataloging catalytic sites and residues identified in enzymes (2014) Nucleic Acids Res, 42, pp. D485-D489
• Gerald, L., Mandell, J.E.B., Raphael, D., (2009) Mandell, Douglas, and Bennett's Principles and Practice of Infectious Diseases, , Philadelphia, PA: ELSEVIER
• Hadfield, T.L., McEvoy, P., Polotsky, Y., Tzinserling, V.A., Yakovlev, A.A., The pathology of diphtheria (2000) J. Infect. Dis, 181, pp. S116-S120
• Hart, P.E., Lee, P.Y., Macallan, D.C., Wansbrough-Jones, M.H., Cutaneous and pharyngeal diphtheria imported from the Indian subcontinent (1996) Postgrad. Med. J, 72, pp. 619-620
• Hassan, S.S., Tiwari, S., Guimaraes, L.C., Jamal, S.B., Folador, E., Sharma, N.B., Proteome scale comparative modeling for conserved drug and vaccine targets identification in Corynebacterium pseudotuberculosis (2014) BMC Genomics, 15, p. S3
• Hodes, H.L., Diphtheria (1979) Pediatr. Clin. North Am, 26, pp. 445-459
• Horecker, B.L., Melloni, E., Pontremoli, S., Fructose 1,6-bisphosphatase: properties of the neutral enzyme and its modification by proteolytic enzymes (1975) Adv. Enzymol. Relat. Areas Mol. Biol, 42, pp. 193-226
• Jamal, S.B., Hassan, S.S., Tiwari, S., Viana, M.V., Benevides, L.J., Ullah, A., An integrative in-silico approach for therapeutic target identification in the human pathogen Corynebacterium diphtheriae (2017) PLOS ONE, 12
• Jamal, S.B., Tiwari, S., Silva, A., Azevedo, V., Pathogenesis of Corynebacterium diphtheriae and available vaccines; an overview (2017) Glob. J. Infect. Dis. Clin. Res, 3, pp. 20-24
• Javid-Majd, F., Yang, D., Ioerger, T.R., Sacchettini, J.C., The 1.25 A resolution structure of phosphoribosyl-ATP pyrophosphohydrolase from Mycobacterium tuberculosis (2008) Acta Crystallogr. D Biol. Crystallogr, 64, pp. 627-635
• Kanehisa, M., Goto, S., KEGG: kyoto encyclopedia of genes and genomes (2000) Nucleic Acids Res, 28, pp. 27-30
• Kinnings, S.L., Xie, L., Fung, K.H., Jackson, R.M., Xie, L., Bourne, P.E., The Mycobacterium tuberculosis drugome and its polypharmacological implications (2010) PLOS Comput. Biol, 6
• Magrane, M., UniProt, C., UniProt Knowledgebase: a hub of integrated protein data (2011) Database, 2011
• Melo, F., Feytmans, E., Assessing protein structures with a non-local atomic interaction energy (1998) J. Mol. Biol, 277, pp. 1141-1152
• Melo, F., Sali, A., Fold assessment for comparative protein structure modeling (2007) Protein Sci, 16, pp. 2412-2426
• Melo, F., Sanchez, R., Sali, A., Statistical potentials for fold assessment (2002) Protein Sci, 11, pp. 430-448
• Perumal, D., Lim, C.S., Sakharkar, K.R., Sakharkar, M.K., Differential genome analyses of metabolic enzymes in Pseudomonas aeruginosa for drug target identification (2007) In Silico Biol, 7, pp. 453-465
• Pizza, M., Scarlato, V., Masignani, V., Giuliani, M.M., Arico, B., Comanducci, M., Identification of vaccine candidates against serogroup B meningococcus by whole-genome sequencing (2000) Science, 287, pp. 1816-1820
• Radusky, L., Defelipe, L.A., Lanzarotti, E., Luque, J., Barril, X., Marti, M.A., TuberQ: a Mycobacterium tuberculosis protein druggability database (2014) Database, 2014
• Radusky, L.G., Hassan, S., Lanzarotti, E., Tiwari, S., Jamal, S., Ali, J., An integrated structural proteomics approach along the druggable genome of Corynebacterium pseudotuberculosis species for putative druggable targets (2015) BMC Genomics, 16
• Rathi, B., Sarangi, A.N., Trivedi, N., Genome subtraction for novel target definition in Salmonella typhi (2009) Bioinformation, 4, pp. 143-150
• Rottger, R., Kalaghatgi, P., Sun, P., Soares Sde, C., Azevedo, V., Wittkop, T., Density parameter estimation for finding clusters of homologous proteins-tracing actinobacterial pathogenicity lifestyles (2013) Bioinformatics, 29, pp. 215-222
• Sakharkar, K.R., Sakharkar, M.K., Chow, V.T., A novel genomics approach for the identification of drug targets in pathogens, with special reference to Pseudomonas aeruginosa (2004) In Silico Biol, 4, pp. 355-360
• Sali, A., Blundell, T.L., Comparative protein modelling by satisfaction of spatial restraints (1993) J. Mol. Biol, 234, pp. 779-815
• Sassetti, C.M., Rubin, E.J., Genetic requirements for mycobacterial survival during infection (2003) Proc. Natl. Acad. Sci. U.S.A, 100, pp. 12989-12994
• Szklarczyk, D., Franceschini, A., Wyder, S., Forslund, K., Heller, D., Huerta-Cepas, J., STRING v10: protein-protein interaction networks, integrated over the tree of life (2015) Nucleic Acids Res, 43, pp. D447-D452
• Trost, E., Blom, J., Soares Sde, C., Huang, I.H., Al-Dilaimi, A., Schroder, J., Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumonia (2012) J. Bacteriol, 194, pp. 3199-3215
• Velec, H.F., Gohlke, H., Klebe, G., DrugScore(CSD)-knowledge-based scoring function derived from small molecule crystal data with superior recognition rate of near-native ligand poses and better affinity prediction (2005) J. Med. Chem, 48, pp. 6296-6303
• Webb, B., Sali, A., Comparative protein structure modeling using MODELLER (2016) Curr. Protoc. Protein Sci, 86, pp. 2.9.1-2.9.37
• Wright, S.W., Carlo, A.A., Carty, M.D., Danley, D.E., Hageman, D.L., Karam, G.A., Anilinoquinazoline inhibitors of fructose 1,6-bisphosphatase bind at a novel allosteric site: synthesis, in vitro characterization, and X-ray crystallography (2002) J. Med. Chem, 45, pp. 3865-3877
• Yates, J.L., Arfsten, A.E., Nomura, M., In vitro expression of Escherichia coli ribosomal protein genes: autogenous inhibition of translation (1980) Proc. Natl. Acad. Sci. U.S.A, 77, pp. 1837-1841
• Yoon, S.H., Park, Y.K., Lee, S., Choi, D., Oh, T.K., Hur, C.G., Towards pathogenomics: a web-based resource for pathogenicity islands (2007) Nucleic Acids Res, 35, pp. D395-D400
• Yu, C.S., Lin, C.J., Hwang, J.K., Predicting subcellular localization of proteins for Gram-negative bacteria by support vector machines based on n-peptide compositions (2004) Protein Sci, 13, pp. 1402-1406
• Zhang, R., Ou, H.Y., Zhang, C.T., DEG: a database of essential genes (2004) Nucleic Acids Res, 32, pp. D271-D272

Citas:

---------- APA ----------

---------- CHICAGO ----------

---------- MLA ----------

---------- VANCOUVER ----------