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Abstract:

Prosopis flexuosa is an arboreal Leguminosae that grows in arid and semiarid temperate zones of Argentina, in the Monte eco-region. It is a promising native forest species for recovering arid and semiarid regions because it plays an important role in erosion control as well as in soil fertility. Furthermore, it provides diverse economical resources. The main challenge to the forestry sector is finding a balance between production and forest protection. For this purpose, it is necessary to gather information about genetic parameters. In this study, we measured the distribution of the variation of 14 quantitative traits in an experimental half-sib stand, where families are representative of hierarchically structured populations. We applied a multivariate extension of the classical QST-FST neutrality test to determine the relative importance of drift versus selection in the distribution of genetic variability. We found strong evidence that different selective regimes act on different traits and that selection favors different optima in each sampling site. The selection to different optima is much stronger among than within provenances. This result helps explain the possible causes for the regional variation observed in P. flexuosa and to define the management units and the evolutionarily significant units for this species. © 2012 Springer-Verlag.

Registro:

Documento: Artículo
Título:Evidence of heterogeneous selection on quantitative traits of Prosopis flexuosa (Leguminosae) from multivariate QST-FST test
Autor:Darquier, M.R.; Bessega, C.F.; Cony, M.; Vilardi, J.C.; Saidman, B.O.
Filiación:Departamento de Ecología, Genética y Evolución, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, 1458 Buenos Aires, Argentina
Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
Instituto Argentino de investigaciones de las zonas Áridas (IADIZA), Centro científico tecnológico (CCT), Mendoza, Argentina
Palabras clave:FST; Forest trees; Molecular markers; Multivariate QST; Prosopis flexuosa; Quantitative traits; Selection; Fabaceae; Prosopis; Prosopis flexuosa
Año:2013
Volumen:9
Número:1
Página de inicio:307
Página de fin:320
DOI: http://dx.doi.org/10.1007/s11295-012-0556-x
Título revista:Tree Genetics and Genomes
Título revista abreviado:Tree Genet. Genomes
ISSN:16142942
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_16142942_v9_n1_p307_Darquier

Referencias:

  • Acosta, M., Oliva, L., Abril, A., Colección de Rhizobios de Prosopis arbóreos en la zona semiárida de la provincia de Córdoba (Argentina) (1994) Ciencia Del Suelo, 12, pp. 38-40
  • Alvarez, J.A., Villagra, P.E., Prosopis flexuosa D.C (Fabeaceae, mimosoideade) (2009) Kurtziana, 35 (1), pp. 47-61
  • Bassam, B.J., Caetano-Anollés, G., Greshoff, P.M., Fast and sensitive silver staining of DNA in polyacrylamide gels (1991) Anal Biochem, 196, pp. 81-84
  • Benjamini, Y., Hochberg, Y., Controlling the false discovery rate: a practical and powerful approach to multiple testing (1995) J R Stat Soc Ser B, 57, pp. 289-300
  • Bessega, C., Ferreyra, L., Julio, N., Montoya, S., Saidman, B.O., Vilardi, J.C., Mating system parameters in species of genus Prosopis (Leguminosae) (2000) Hereditas, 132 (1), pp. 19-27
  • Bessega, C., Ferreyra, L., Vilardi, J.C., Saidman, B.O., Unexpected low genetic differentiation among allopatric species of section Algarobia of Prosopis (Leguminosae) (2000) Genetica, 109, pp. 255-266
  • Bessega, C., Saidman, B.O., Darquier, M.R., Ewens, M., Sánchez, L., Rozenberg, P., Vilardi, J.C., Consistency between marker and genealogy-based heritability estimates in an experimental stand of Prosopis alba (Leguminosae) (2009) Am J Bot, 96, pp. 458-465
  • Bessega, C., Saidman, B.O., Darquier, M.R., Ewens, M., Felker, P., Vilardi, J.C., Accuracy of dominant markers for estimation of relatedness and heritability in an experimental stand of Prosopis alba (Leguminosae) (2010) Tree Genet Genome, 7, pp. 103-115
  • Bessega, C., Pometti, C.L., Ewens, M., Saidman, B.O., Vilardi, J.C., Strategies for conservation for disturbed Prosopis alba (Leguminosae, Mimosoidae) forests based on mating system and pollen dispersal parameters (2011) Tree Genet Genome., , doi: 10. 1007/s11295-011-0439-6
  • Black IV, W.C., (1996) Fortran Programs for the Analysis of RAPD-PCR Markers in Populations, , Ft. Collins, CO: Colorado State University
  • Box, G.E.P., Cox, D.R., An analysis of transformations (with discussion) (1964) J R Stat Soc Ser B, 26, pp. 211-252
  • Brizuela, M.M., Burghardt, A.D., Tanoni, D., Palacios, R.A., Estudio de la variación morfológica de Prosopis flexuosa en tres procedencias y su manifestación en cultivos bajo condiciones uniformes (2000) Multequina, 9, pp. 07-15
  • Burghardt, A.D., Espert, S.M., Braun-Wilke, S.H., Variabilidad genética en Prosopis ferox (Mimosaceae) (2004) Darviniana, 42 (1-4), pp. 31-36
  • Burkart, A., A monograph of the genus Prosopis (1976) J Arn Arb, 57, pp. 3-4
  • Burkart, R., BarbaroN, Sánchez, R.O., Gómez, D.A., (1999) Ecorregiones de la Argentina, , Administración de Parques Nacionales PRODIA
  • Chapuis, E., Martin, G., Goudet, J., Effects of selection and drift on G matrix evolution in a heterogeneous environment: a multivariate Qst-Fst test with the freshwater snail Galba truncatula (2008) Genetics, 180, pp. 2151-2161
  • Chenoweth, S.F., Blows, M.W., Qst meets the G matrix: the dimensionality of adaptive divergence in multiple correlated quantitative traits (2008) Evolution, 62, pp. 1437-1449
  • Chessel, D., Dufour, A.B., Thioulouse, J., The ade4 package-I-one-table methods (2004) R News, 4, pp. 5-10
  • Cony, M.A., Genetic variability in Prosopis flexuosa D.C. a native tree of Monte phytogeography province, Argentina (1996) For Ecol Manage, 87, pp. 41-49
  • Cony, M.A., Programa de consetvaci6n y mejoramiento de especies de1 genera Prosopis en la Provincia Fitogeografica del Monte, Argentina (1993) Contibuciones Mendocinas a la Quinta Reunion Regional para America Latina y el Caribe, de la Red de Forestaci0n de1 CIID, pp. 37-72. , Unidades de Botanica y Fisiologia Vegetal, IADIZA
  • R: a language and environment for statistical computing (2011) R Foundation for Statistical Computing: Vienna, Austria, , http://www.R-project.org, R Development Core Team ISBN 3-900051-07-0. Available from
  • Dray, S., Dufour, A.B., The ade4 package: implementing the duality diagram for ecologists (2007) J Stat Softw, 22 (4), pp. 1-20
  • Dray, S., Dufour, A.B., Chessel, D., The ade4 package-II: two-table and K-table methods (2007) R News, 7 (2), pp. 47-52
  • Edelaar, P., Burraco, P., Gomez-Mestre, I., Comparison between QST and FST-how wrong have we been? (2011) Mol Ecol, 2, pp. 4830-4839
  • Excoffier, L., Smouse, P.E., Quattro, J.M., Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data (1992) Genetics, 131, pp. 479-491
  • Falconer, D.S., Mackay, T.F.C., (1989) Introduction to Quantitative Genetics, , 3rd edn., Harlow, UK: Longman
  • (2004) Forest Genetic Resources Conservation and Management Vol. 1: Overview, Concepts and Some Systematic Approaches, , FAO, FLD, IPGRI, Rome, Italy: International Plant Genetic Resources Institute
  • Goudet, J., Hierfstat, a package for R to compute and test hierarchical F statistics (2005) Mol Ecol Notes, 5, pp. 184-186. , http://www.unil.ch/popgen/softwares/hierfstat.htm
  • Hamrick, J.L., Response of forest trees to global environmental changes (2004) For Ecol Manage, 197, pp. 323-335
  • Hartl, D.L., Clark, A.G., (1989) Principles of Population Genetics, , Sunderland, MA: Sinauer
  • Hedrick, P.W., (2000) Genetics of Populations (2nd Edn), , Sudbury, MA: Jones and Bartlett Publishers
  • Kimura, M., (1983) The Neutral Theory of Molecular Evolution, , Sunderland, MA: Evolution of Genes and Proteins Sinauer
  • Kruuk, L.E.B., Estimating genetic parameters in natural populations using the 'animal model (2004) Philos Trans R Soc Lond B Biol Sci, 359, pp. 873-890
  • Lande, R., Neutral theory of quantitative genetic variance in an island model with local extinction and colonization (1992) Evolution, 46, pp. 381-389
  • Lande, R., Arnold, S.J., The measurement of selection on correlated characters (1983) Evolution, 37, pp. 1210-1226
  • Leinonen, T., O'Hara, R.B., Cano, J.M., Merilä, J., Comparative studies of quantitative trait and neutral marker divergence: a meta-analysis (2008) J Evol Biol, 21, pp. 1-17
  • Lopez-Fanjul, C., Fernandez, A., Toro, M.A., The effect of dominance on the use of the QST-FST contrasts to detect natural selection on quantitative traits (2007) Genetics, 176, pp. 725-727
  • Lynch, M., Walsh, B., (1998) Genetics and Analyses of Quantitative Traits, , Sunderland, MA: Sinauer
  • Mantován, N.G., Early growth differentiation among Prosopis flexuosa D.C provenances from the Monte phytogeographic province, Argentina (2002) New For, 23, pp. 19-30
  • Martin, G., Chapuis, E., Goudet, J., Multivariate QST-FST comparisons: a neutrality test for the evolution of the G matrix in structured populations (2008) Genetics, 180, pp. 2135-2149
  • Mc Guigan, K., Studying phenotypic evolution using multivariate quantitative genetics (2006) Mol Ecol, 15, pp. 883-896
  • Merilä, J., Crnokrak, P., Comparison of genetic differentiation at marker loci and quantitative traits (2001) J Evol Biol, 14, pp. 892-903
  • Morello, J., Crudelli, N., Saraceno, M., (1971) Los vinalares de Formosa, República Argentina, p. 111. , Serie Fitogeográfica No 11. INTA
  • Moritz, C., Defining 'evolutionarily significant units' for conservation (1994) Tree, 9, pp. 373-375
  • Nagylaki, T., Fixation indices in subdivided populations (1998) Genetics, 148, pp. 1325-1332
  • Nei, M., (1987) Molecular Evolutionary Genetics, , New York: Columbia University Press
  • O'Hara, R.B., Merilä, J., Bias and precision in QST estimates: problems and some solutions (2005) Genetics, 171, pp. 1331-1339
  • Otha, T., Linkage disequilibrium due to random genetic drift in finite subdivided populations (1982) Proc Natl Acad Sci, 79, pp. 1940-1944
  • Ovaskainen, O., Karhunrn, M., Zheng, C.H., Cano Arias, J.M., Merilä, J., A new method to uncover signatures of divergent and stabilizing selection in quantitative traits (2011) Genetics, 189, pp. 621-632
  • Palacios, R.A., Bravo, L.D., Hibridación natural en Prosopis (Leguminosae) en la Región Chaqueña Argentina. Evidencias morfológicas y cromatográficas (1981) Darwiniana, 23, pp. 3-35
  • Pinheiro, J., Bates, D., DebRoy, S., Sarkar, D., (2011) Nlme: Linear and Nonlinear Mixed Effects Models, , the R Development Core Team R Package
  • Reed, D.H., Frankham, R., How closely correlated are molecular and quantitative measures of genetic variation? A meta-analysis (2001) Evolution, 55 (6), pp. 1095-1103
  • Rogers, A.R., Population differences in quantitative characters as opposed to gene frequencies (1986) Am Nat, 127, pp. 729-730
  • Roig, F.A., Aportes a la Etnobotánica del Género Prosopis (1993) Contribuciones Mendocinas a la quinta Reunión Regional para América Latina y el Caribe de la Red de Forestación del CIID, pp. 99-121. , Unidades de Botánica y Fisiología vegetal, IADIZA (eds)
  • Sæether, S.A., Fiske, P., Kalas, J.A., Kuresoo, A., Luiguoe, L., Piertney, S.A., Sahlaman, T., Höglund, J., Inferring local adaptation from QST-FST comparisons: neutral genetic and quantitative trait variation in European populations of great snipe (2007) J Evol Biol, 20, pp. 1563-1576
  • Saidman, B.O., Vilardi, J.C., Analysis of the genetic similarities among seven species of Prosopis (Leguminosae: Mimosoideae) (1987) Theoretical App Genet, 75, pp. 109-116
  • Saidman, B.O., Vilardi, J.C., Pocovi, M.I., Acreche, N., Genetic divergence among species of the section Strombocarpa genus Prosopis (Leguminosae) (1996) J Genet, 75, pp. 139-149
  • Saidman, B.O., Vilardi, J.C., Montoya, S., Dieguez, M.J., Hopp, H.E., Molecular markers: a tool for the understanding of the relationships among species of Prosopis (Leguminosae, Mimosoidae) (1998) Tree Improvement: Applied Research and Technology Transfer, pp. 311-324. , Ch 21, S. Puri (Ed.), U. S. A: Science Publishers Inc
  • Saidman, B.O., Bessega, C., Ferreyra, L., Vilardi, J.C., Random amplified polymorphic DNA (RAPDS) variation in hybrid swarms and pure populations of genus Prosopis (1998) Recent Advances in Biotechnology for Tree Conservation and Management, pp. 122-134. , ISBN: 91 85798 460, S. Bruns, S. Mantell, C. Tragärdh, and A. V. Viana (Eds.), Stockholm: International Foundation for Sciences
  • Schluter, D., Adaptive radiation along genetic lines of least resistance (1996) Evolution, 50, pp. 1766-1774
  • Spitze, K., Population structure in Daphnia obtusa: quantitative genetic and allozymic variation (1993) Genetics, 135, pp. 367-374
  • Stean, D.A., Conod, N., Jones, R.C., Vaillancourt, R.E., Potts, B.M., A comparative analysis of population structure of forest tree, Eucaliptus globules (Myrtaceae), using microsatellite markers and quantitative traits (2006) Tree Genet Genome, 2, pp. 30-38
  • Templeton, A.R., The meaning of species and speciation: a genetic perspective (1989) Speciation and Its Consequences, pp. 3-27. , D. Otte and J. A. Endler (Eds.), Sunderland, Massachusetts: Sinauer Associates Inc
  • Trevor, P., Schluter, D., On the low heritability of life-history traits (1991) Evolution, 45 (4), pp. 853-861
  • Vekemans, X., (2002) AFLP-SURV Version 1.0. Distributed by the Author, , Belgium: Laboratoire de Génétique et Ecologie Végétale, Université Libre de Bruxelles
  • Venables, W.N., Ripley, B.D., (2002) Modern Applied Statistics with S, , Fourthth edn., ISBN 0-387-95457-0, New York: Springer
  • Verga, A., Mottura, M., Melchiorre, M., Jouseau, J., Carranza, C., Ledesma, M., Recalde, D., Vega, R., (2005) El Proyecto Algarrobo del INTA IDIA, XXI (8), pp. 195-200
  • Verga, A., López Lauenstein, D., López, C., Navall, M., Joseau, J., Gómez, C., Royo, O., Marcó, M., Caracterización morfológica de los algarrobos (Prosopis sp.) en las regiones fitogeográficas Chaqueña y Espinal norte de Argentina (2009) Quebracho, 17 (1-2), pp. 31-40
  • Wright, S., The genetic structure of populations (1951) Annu Eugenics, 15, pp. 323-354
  • Zhivotovsky, L.A., Estimating population structure in diploids with multilocus dominant DNA markers (1999) Mol Ecol, 8 (6), pp. 907-913
  • Zietkiewicz, E., Rafalski, A., Labuda, D., Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification (1994) Genomics, 20, pp. 176-183

Citas:

---------- APA ----------
Darquier, M.R., Bessega, C.F., Cony, M., Vilardi, J.C. & Saidman, B.O. (2013) . Evidence of heterogeneous selection on quantitative traits of Prosopis flexuosa (Leguminosae) from multivariate QST-FST test. Tree Genetics and Genomes, 9(1), 307-320.
http://dx.doi.org/10.1007/s11295-012-0556-x
---------- CHICAGO ----------
Darquier, M.R., Bessega, C.F., Cony, M., Vilardi, J.C., Saidman, B.O. "Evidence of heterogeneous selection on quantitative traits of Prosopis flexuosa (Leguminosae) from multivariate QST-FST test" . Tree Genetics and Genomes 9, no. 1 (2013) : 307-320.
http://dx.doi.org/10.1007/s11295-012-0556-x
---------- MLA ----------
Darquier, M.R., Bessega, C.F., Cony, M., Vilardi, J.C., Saidman, B.O. "Evidence of heterogeneous selection on quantitative traits of Prosopis flexuosa (Leguminosae) from multivariate QST-FST test" . Tree Genetics and Genomes, vol. 9, no. 1, 2013, pp. 307-320.
http://dx.doi.org/10.1007/s11295-012-0556-x
---------- VANCOUVER ----------
Darquier, M.R., Bessega, C.F., Cony, M., Vilardi, J.C., Saidman, B.O. Evidence of heterogeneous selection on quantitative traits of Prosopis flexuosa (Leguminosae) from multivariate QST-FST test. Tree Genet. Genomes. 2013;9(1):307-320.
http://dx.doi.org/10.1007/s11295-012-0556-x