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Jayasiri, S.C.; Hyde, K.D.; Ariyawansa, H.A.; Bhat, J.; Buyck, B.; Cai, L.; Dai, Y.-C.; Abd-Elsalam, K.A.; Ertz, D.; Hidayat, I.; Jeewon, R.; Jones, E.B.G.; Bahkali, A.H.; Karunarathna, S.C.; Liu, J.-K.; Luangsa-ard, J.J.; Lumbsch, H.T.; Maharachchikumbura, S.S.N. (...) Promputtha, I. "The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts" (2015) Fungal Diversity. 74(1):3-18
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Abstract:

Taxonomic names are key links between various databases that store information on different organisms. Several global fungal nomenclural and taxonomic databases (notably Index Fungorum, Species Fungorum and MycoBank) can be sourced to find taxonomic details about fungi, while DNA sequence data can be sourced from NCBI, EBI and UNITE databases. Although the sequence data may be linked to a name, the quality of the metadata is variable and generally there is no corresponding link to images, descriptions or herbarium material. There is generally no way to establish the accuracy of the names in these genomic databases, other than whether the submission is from a reputable source. To tackle this problem, a new database (FacesofFungi), accessible at www.facesoffungi.org (FoF) has been established. This fungal database allows deposition of taxonomic data, phenotypic details and other useful data, which will enhance our current taxonomic understanding and ultimately enable mycologists to gain better and updated insights into the current fungal classification system. In addition, the database will also allow access to comprehensive metadata including descriptions of voucher and type specimens. This database is user-friendly, providing links and easy access between taxonomic ranks, with the classification system based primarily on molecular data (from the literature and via updated web-based phylogenetic trees), and to a lesser extent on morphological data when molecular data are unavailable. In FoF species are not only linked to the closest phylogenetic representatives, but also relevant data is provided, wherever available, on various applied aspects, such as ecological, industrial, quarantine and chemical uses. The data include the three main fungal groups (Ascomycota, Basidiomycota, Basal fungi) and fungus-like organisms. The FoF webpage is an output funded by the Mushroom Research Foundation which is an NGO with seven directors with mycological expertise. The webpage has 76 curators, and with the help of these specialists, FoF will provide an updated natural classification of the fungi, with illustrated accounts of species linked to molecular data. The present paper introduces the FoF database to the scientific community and briefly reviews some of the problems associated with classification and identification of the main fungal groups. The structure and use of the database is then explained. We would like to invite all mycologists to contribute to these web pages. © 2015, School of Science.

Registro:

Documento: Artículo
Título:The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts
Autor:Jayasiri, S.C.; Hyde, K.D.; Ariyawansa, H.A.; Bhat, J.; Buyck, B.; Cai, L.; Dai, Y.-C.; Abd-Elsalam, K.A.; Ertz, D.; Hidayat, I.; Jeewon, R.; Jones, E.B.G.; Bahkali, A.H.; Karunarathna, S.C.; Liu, J.-K.; Luangsa-ard, J.J.; Lumbsch, H.T.; Maharachchikumbura, S.S.N.; McKenzie, E.H.C.; Moncalvo, J.-M.; Ghobad-Nejhad, M.; Nilsson, H.; Pang, K.-L.; Pereira, O.L.; Phillips, A.J.L.; Raspé, O.; Rollins, A.W.; Romero, A.I.; Etayo, J.; Selçuk, F.; Stephenson, S.L.; Suetrong, S.; Taylor, J.E.; Tsui, C.K.M.; Vizzini, A.; Abdel-Wahab, M.A.; Wen, T.-C.; Boonmee, S.; Dai, D.Q.; Daranagama, D.A.; Dissanayake, A.J.; Ekanayaka, A.H.; Fryar, S.C.; Hongsanan, S.; Jayawardena, R.S.; Li, W.-J.; Perera, R.H.; Phookamsak, R.; de Silva, N.I.; Thambugala, K.M.; Tian, Q.; Wijayawardene, N.N.; Zhao, R.-L.; Zhao, Q.; Kang, J.-C.; Promputtha, I.
Filiación:Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand
World Agro forestry Centre East and Central Asia Office, 132 Lanhei Road, Kunming, 650201, China
Botany and Microbiology Department, College of Science, King Saud University, Riyadh, 1145, Saudi Arabia
Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Sciences, Guiyang, Guizhou 550006, China
No. 128/1-J, Azad Housing Society, Curca, Goa, P.O. Goa Velha, 403108, India
Department of Botany, Goa University, Goa, 403 206, India
Muséum National d’Histoire Naturelle, Département Systématique et Evolution, CP 39, ISYEB, UMR 7205 CNRS MNHN UPMC EPHE, 12 Rue Buffon, Paris, F-75005, France
State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, West Beicheng Rd, Beijing, China
Institute of Microbiology, Beijing Forestry University, PO Box 61, Beijing, 100083, China
Plant Pathology Research Institute, Agricultural Research Center (ARC), Giza, 12619, Egypt
Botanic Garden Meise, Department Bryophytes-Thallophytes (BT), Nieuwelaan 38, Meise, B-1860, Belgium
Fédération Wallonie-Bruxelles, Direction Générale de l’Enseignement non obligatoire et de la Recherche scientifique, Rue A. Lavallée 1, Bruxelles, 1080, Belgium
Microbiology Division, Research Center for Biology, Indonesian Institute of Sciences (LIPI), Jl. Raya Jakarta-Bogor KM 46, Cibinong, West Java 16911, Indonesia
Department of Health Sciences, University of Mauritius, Reduit, Mauritius
Microbe Interaction Laboratory (BMIT), BIOTEC, National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Thanon Phahonyothin, Tombon Khlong Nueng, Amphoe Khlong Luang, Pathum Thani 12120, Thailand
Science & Education, The Field Museum, 1400 S. Lake Shore Drive, Chicago, IL 60605, United States
Manaaki Whenua Landcare Research, Private Bag 92170, Auckland, New Zealand
Department of Natural History, Royal Ontario Museum, and Department of Ecology and Evolutionary Biology, University of Toronto, 100 Queen’s Park, Toronto, ON M5S2C6, Canada
Department of Biotechnology, Iranian Research Organization for Science and Technology (IROST), P.O. Box 33535111, Tehran, Iran
Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, Gothenburg, 405 30, Sweden
Institute of Marine Biology and Centre of Excellence for the Oceans, National Taiwan Ocean University, 2 Pei-Ning Road, Keelung, Taiwan 20224, Taiwan
Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais 36570-900, Brazil
UCIBIO-REQUIMTE, Departamento de Ciências da Vida, Universidade Nova de Lisboa, Caparica, 2829-516, Portugal
Department of Biology & The Cumberland Mountain Research Center, Lincoln Memorial University, Harrogate, TN 37752, United States
PROPLAME-PRHIDEB, Consejo Nacional de Investigaciones Científicas y Técnicas, Dep. de Biodiversidad y Biología Experimental, Ciudad Universitaria, Pabellón II, 4to. Piso, Buenos Aires, CP1428EHA, Argentina
Department of Biology and Geology (English), Instituto ES Zizur, Ronda San Cristóbal, 196, Zizur Mayor, Navarra 31180, Spain
Department of Biology, Ahi Evran University, Kırsehir, Turkey
Department of Biological Sciences, University of Arkansas, Fayetteville, AR 72701, United States
Fungal Biodiversity Laboratory (BFBD), BIOTEC, National Science and Technology Development Agency (NSTDA), 113 Thailand Science Park, Phahonyothin Road, Khlong Nueng, Amphoe Khlong Luang, Pathum Thani 12120, Thailand
Royal Botanic Garden Edinburgh, 20A Inverleith Row, Edinburgh, EH3 5LR, United Kingdom
Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC V6T 1Z, Canada
Department of Life Sciences and Systems Biology, University of Turin, Turin, I-10125, Italy
Department of Botany and Microbiology, Sohag University, Sohag, 82524, Egypt
Engineering Research Center of Southwest Bio-Pharmaceutical Resources, Ministry of Education, Guizhou University, Guiyang, Guizhou Province 550025, China
Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, No. 9 of Shu Guang Hua Yuan Zhong Lu, Haidian District, Beijing, 10097, China
School of Biology, Flinders University, GPO Box 2100, Adelaide, SA 5001, Australia
Department of Biology, Chiang Mai University, Chiang Mai, 50200, Thailand
Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural Science, Kunming, 650223, China
Palabras clave:Classification; Database; FacesofFungi; Fungi; Phylogeny; Taxonomy
Año:2015
Volumen:74
Número:1
Página de inicio:3
Página de fin:18
DOI: http://dx.doi.org/10.1007/s13225-015-0351-8
Título revista:Fungal Diversity
Título revista abreviado:Fungal Diversity
ISSN:15602745
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_15602745_v74_n1_p3_Jayasiri

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Citas:

---------- APA ----------
Jayasiri, S.C., Hyde, K.D., Ariyawansa, H.A., Bhat, J., Buyck, B., Cai, L., Dai, Y.-C.,..., Promputtha, I. (2015) . The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts. Fungal Diversity, 74(1), 3-18.
http://dx.doi.org/10.1007/s13225-015-0351-8
---------- CHICAGO ----------
Jayasiri, S.C., Hyde, K.D., Ariyawansa, H.A., Bhat, J., Buyck, B., Cai, L., et al. "The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts" . Fungal Diversity 74, no. 1 (2015) : 3-18.
http://dx.doi.org/10.1007/s13225-015-0351-8
---------- MLA ----------
Jayasiri, S.C., Hyde, K.D., Ariyawansa, H.A., Bhat, J., Buyck, B., Cai, L., et al. "The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts" . Fungal Diversity, vol. 74, no. 1, 2015, pp. 3-18.
http://dx.doi.org/10.1007/s13225-015-0351-8
---------- VANCOUVER ----------
Jayasiri, S.C., Hyde, K.D., Ariyawansa, H.A., Bhat, J., Buyck, B., Cai, L., et al. The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts. Fungal Diversity. 2015;74(1):3-18.
http://dx.doi.org/10.1007/s13225-015-0351-8