Artículo

Liu, J.-K.; Phookamsak, R.; Doilom, M.; Wikee, S.; Li, Y.-M.; Ariyawansha, H.; Boonmee, S.; Chomnunti, P.; Dai, D.-Q.; Bhat, J.D.; Romero, A.I.; Zhuang, W.-Y.; Monkai, J.; Jones, E.B.G.; Chukeatirote, E.; Ko Ko, T.W.; Zhao, Y.-C.; Wang, Y.; Hyde, K.D. "Towards a natural classification of Botryosphaeriales" (2012) Fungal Diversity. 57(1):149-210
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Abstract:

The type specimens of Auerswaldia, Auerswaldiella, Barriopsis, Botryosphaeria, Leptoguignardia, Melanops, Neodeightonia, Phaeobotryon, Phaeobotryosphaeria, Phyllachorella, Pyrenostigme, Saccharata, Sivanesania, Spencermartinsia and Vestergrenia were examined and fresh specimens of Botryosphaeriales were collected from Thailand. This material is used to provide a systematic treatment of Botryosphaeriales based on morphology and phylogeny. Two new genera, Botryobambusa and Cophinforma are introduced and compared with existing genera. Four species new to science, Auerswaldia dothiorella, A. lignicola, Botryosphaeria fusispora and Phaeobotryosphaeria eucalypti, are also described and justified. We accept 29 genera in Botryosphaeriales, with Macrovalsaria being newly placed. In the phylogenetic tree, the 114 strains of Botyrosphaeriales included in the analysis cluster into two major clades with 80 %, 96 % and 1.00 (MP, ML and BY) support, with Clade A containing the family type of Botryosphaeriaceae, and Clade B containing Phyllosticta, Saccharata and Melanops species. This group may represent Phyllostictaceae. In Clade A the taxa analyzed cluster in eight sub-clades (Clades A1-8). Clade A1 comprises three distinct subclusters corresponding to the genera Diplodia (Diplodia Clade), Neodeightonia (Neodeightonia Clade) and Lasiodiplodia (Lasiodiplodia Clade). Clade A2 clusters into three groups representing Phaeobotryosphaeria (100 %), Phaeobotryon (100 %) and Barriopsis (94 %). Clade A3 incorporates 17 strains that cluster into three well-supported genera (Dothiorella (86 %), Spencermartinsia (100 %) and Auerswaldia (63 %); the position of Macrophomina is not stable. Clade A4 is a single lineage (100 %) representing the new genus Botryobambusa. Clade A5 is a well-supported subclade incorporating Neofussicoccum. Clade A6 represents the type species of Botryosphaeria, three other Botryosphaeria species and two other genera, Neoscytalidium and Cophinforma gen. nov. Clade A7 comprises two Pseudofusicoccum species and Clade A8 has two Aplosporella species. These sub-clades may eventually require separate families but this requires analysis of a much larger dataset. Our data advances the understanding of Botryosphaeriales, there is, however, still much research to be carried out with resolution of families and genera, linkage of sexual and asexual morphs and differentiation of cryptic species. © 2012 Mushroom Research Foundation.

Registro:

Documento: Artículo
Título:Towards a natural classification of Botryosphaeriales
Autor:Liu, J.-K.; Phookamsak, R.; Doilom, M.; Wikee, S.; Li, Y.-M.; Ariyawansha, H.; Boonmee, S.; Chomnunti, P.; Dai, D.-Q.; Bhat, J.D.; Romero, A.I.; Zhuang, W.-Y.; Monkai, J.; Jones, E.B.G.; Chukeatirote, E.; Ko Ko, T.W.; Zhao, Y.-C.; Wang, Y.; Hyde, K.D.
Filiación:Institute of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand
School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
International Fungal Research and Development Centre, Research Institute of Resource Insects, Chinese Academy of Forestry, Kunming 650034, China
Formerly at Department of Botany, Goa University, Goa 403 206, India
Prhideb-Conicet, Deptomento Cs. Biológicas, Ciudad Universitaria, Pabellón II, 4to Piso, 1428 Buenos Aires, Argentina
State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China
Institute of Ocean and Earth Sciences (IOES), C308, Institute of Postgraduate Studies Building, University of Malaya, Kuala Lumpur 50603, Malaysia
Macrofungi Research Lab, Institute of Biotechnology and Germplasmic Resource, Yunnan Academy of Agricultural Science, Kunming 650034, China
Department of Plant Pathology, Agriculture College, Guizhou University, Guiyang 550025, China
Palabras clave:Asexual morphs; Botryosphaeria; Botryosphaeriaceae; Classification; Diplodia; Generic types; Lasiodiplodia; Multi-gene phylogeny; New genera; Phyllosticta
Año:2012
Volumen:57
Número:1
Página de inicio:149
Página de fin:210
DOI: http://dx.doi.org/10.1007/s13225-012-0207-4
Título revista:Fungal Diversity
Título revista abreviado:Fungal Diversity
ISSN:15602745
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_15602745_v57_n1_p149_Liu

Referencias:

  • Abdollahzadeh, J., Goltapeh, E.M., Javadi, A., Shams-Bakhsh, M., Zare, R., Phillips, A.J.L., Barriopsis iraniana and Phaeobotryon cupressi: Two new species of the Botryosphaeriaceae from trees in Iran (2009) Persoonia, 23, pp. 1-8. , 20198156 1:STN:280:DC%2BC3c7ltlCmtA%3D%3D
  • Abdollahzadeh, J., Javadi, A., Goltapeh, E.M., Zare, R., Phillips, A.J.L., Phylogeny and morphology of four new species of Lasiodiplodia from Iran (2010) Persoonia, 25, pp. 1-10. , 21339962 1:STN:280:DC%2BC3M3htVSgtA%3D%3D
  • Adesemoye, A.O., Eskalen, A., First report of Spencermartinsia viticola, Neofusicoccum australe, and N. parvum causing branch canker of citrus in California (2011) Plant Dise, 95, pp. 770-770
  • Alves, A., Correia, A., Luque, J., Phillips, A., Botryosphaeria corticola, sp. nov. on Quercus species, with notes and description of Botryosphaeria stevensii and its anamorph, Diplodia mutila (2004) Mycologia, 96 (3), pp. 598-613
  • Alves, A., Correia, A., Phillips, A.J.L., Multi-gene genealogies and morphological data support Diplodia cupressi sp. nov., previously recognized as D. pinea f. sp. cupressi, as a distinct species (2006) Fungal Diversity, 23, pp. 1-15
  • Alves, A., Crous, P.W., Correia, A., Phillips, A.J.L., Morphological and molecular data reveal cryptic speciation in Lasiodiplodia theobromae (2008) Fungal Diversity, 28, pp. 1-13
  • Barber, P.A., Burgess, T.J., Hardy, G.E.St.J., Slippers, B., Keane, P.J., Wingfield, M.J., Botryosphaeria species from Eucalyptus in Australia are pleoanamorphic, producing Dichomera synanamorphs in culture (2005) Mycological Research, 109 (12), pp. 1347-1363. , DOI 10.1017/S0953756205003989, PII S0953756205003989
  • Barr, M.E., (1972) Preliminary Studies on the Dothideales in Temperate North America
  • Barr, M.E., (1987) Prodomus to the Class Loculoascomycetes, , Published by the author Amherst, MA
  • Bisby, G.R., Mason, E.W., List of Pyrenomycetes recorded for Britain (1940) Trans Br Mycol Soc, 24, pp. 127-243
  • Boonmee, S., Zhang, Y., Chomnunti, P., Chukeatirote, E., Tsui, C.K.M., Bahkali, A.H., Hyde, K.D., Revision of lignicolous Tubeufiaceae based on morphological reexamination and phylogenetic analysis (2011) Fungal Divers, 51, pp. 63-102
  • Booth, C., Studies of pyrenomycetes: III Otthia spiraeae (Fuckel) Fuckel, syn. Diplodia sarmentorum (Fr.) Fr (1958) Trans Br Mycol Soc, 41, pp. 335-340
  • Burgess, T.I., Barber, P.A., Mohali, S., Pegg, G., De Beer, W., Wingfield, M.J., Three new Lasiodiplodia spp. from the tropics, recognized based on DNA sequence comparisons and morphology (2006) Handbook of Environmental Chemistry, Volume 5: Water Pollution, 98 (3), pp. 423-435. , http://www.mycologia.org/cgi/reprint/98/3/423
  • Cai, L., Giraud, T., Zhang, N., Begerow, D., Cai, G., Shivas, R.G., The evolution of species concepts and species recognition criteria in plant pathogenic fungi (2011) Fungal Divers, 50, pp. 121-133
  • Cai, L., Jeewon, R., Hyde, K.D., Phylogenetic investigations of Sordariaceae based on multiple gene sequences and morphology (2006) Mycological Research, 110 (2), pp. 137-150. , DOI 10.1016/j.mycres.2005.09.014, PII S0953756205000201
  • Carbone, I., Kohn, L.M., A method for designing primer sets for speciation studies in filamentous ascomycetes (1999) Mycologia, 91 (3), pp. 553-556
  • Cesati, V., De Notaris, G., Schema di classificazione degli sferiacei italici aschigeri piu' o meno appartenenti al genere Sphaeria nell'antico significato attribuitoglide Persoon (1863) Comment Soc Crittog Ital, 4, pp. 177-240
  • Chevenet, F., Brun, C., Bañuls, A.L., Jacq, B., Christen, R., TreeDyn: Towards dynamic graphics and annotations for analyses of trees (2006) BMC Bioinforma, 7 (1), p. 439
  • Chomnunti, P., Schoch, C.L., Aguirre-Hudson, B., Ko-Ko, T.W., Hongsanan, S., Jones, E.B.G., Kodsueb, R., Hyde, K.D., Capnodiaceae (2011) Fungal Divers, 51, pp. 103-134. , 22737101
  • Clendenin, I., Lasiodiplodia E. & E., n. gen (1896) Bot Gaz, 21 (2), p. 92
  • Cooke, M.C., (1871) Handbook of British Fungi, , Illustrations of British Fungi 2nd edn. London: Hardwicke
  • Cooke, M.C., Fungi of New Zealand (1890) Grevillea, 19, pp. 47-49
  • Crous, P.W., Denman, S., Taylor, J.E., Swart, L., Palm, M.E., Cultivation and diseases of Proteaceae: Leucadendron, Leucospermum and Protea (2004) Centraalbureau voor Schimmelcultures (CBS), 2
  • Crous, P.W., Palm, M.E., Reassessment of the anamorph genera Botryodiplodia, Dothiorella and Fusicoccum (1999) Sydowia, 51 (2), pp. 167-175
  • Crous, P.W., Slippers, B., Wingfield, M.J., Rheeder, J., Marasas, W.F.O., Philips, A.J.L., Alves, A., Groenewald, J.Z., Phylogenetic lineages in the Botryosphaeriaceae (2006) Studies in Mycology, 55, pp. 235-253
  • Damm, U., Cannon, P.F., Woudenberg, J.H.C., Crous, P.W., The Colletotrichum acutatum species complex (2012) Stud Mycol, 73, pp. 37-113
  • Damm, U., Cannon, P.F., Woudenberg, J.H.C., Johnston, P.R., Weir, B.S., Tan, Y.P., Shivas, R.G., Crous, P.W., The Colletotrichum boninense species complex (2012) Stud Mycol, 73, pp. 1-36
  • Damm, U., Crous, P.W., Fourie, P.H., Botryosphaeriaceae as potential pathogens of Prunus species in South Africa, with descriptions of Diplodia africana and Lasiodiplodia plurivora sp. nov (2007) Mycologia, 99, pp. 664-680. , 18268901 1:CAS:528:DC%2BD1cXhslOlsrc%3D
  • Damm, U., Fourie, P.H., Crous, P.W., Aplosporella prunicola, a novel species of anamorphic Botryosphaeriaceae (2007) Fungal Diversity, 27, pp. 35-43
  • Denman, P.W., Taylor, J.E., Kang, J.C., Pascoe, I., Michael, J., An overview of the taxonomic history of Botryosphaeria, and a re-evaluation of its anamorphs based on morphology and ITS rDNA phylogeny (2000) Stud Mycol, 45, pp. 29-140
  • Denman, S., Crous, P.W., Groenewald, J.Z., Slippers, B., Wingfield, B.D., Wingfield, M.J., Circumscription of Botryosphaeria species associated with Proteaceae based on morphology and DNA sequence data (2003) Mycologia, 95 (2), pp. 294-307
  • Denman, S., Crous, P.W., Wingfield, M.J., A taxonomic reassessment of Phyllachora proteae, a leaf pathogen of Proteaceae (1999) Mycologia, 91 (3), pp. 510-516
  • Doidge, E.M., Revised descriptions of South African species of Phyllachora and related genera (1942) Bothalia, 4, pp. 421-463
  • Eriksson, O., The families of bitunicate Ascomycetes (1981) Opera Botanica, 60, pp. 1-220
  • Farr, M.L., Two new species of tropical fungi (1989) Memoirs of the New York Botanical Garden, 49, pp. 70-73
  • Felsenstein, J., (2004) Inferring Phytogenies, , Sinauer Associates Sunderland, Massachusetts
  • Fries, E., (1823) Systema Mycolgicum, 2 (2), pp. 423-424
  • Fuckel, L., Symbolae mycologicae: Beiträge zur Kenntniss der rheinischen Pilze (1870) Jahrb Nassauischen Vereins Naturk, 23-24, pp. 1-459
  • Ghimire, S.R., Charlton, N.D., Bell, J.D., Krishnamurthy, Y.L., Craven, K.D., Biodiversity of fungal endophyte communities inhabiting switchgrass (Panicum virgatum L.) growing in the native tallgrass prairie of northern Oklahoma (2011) Fungal Divers, 47, pp. 19-27
  • Glass, N.L., Donaldson, G.C., Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes (1995) Appl Environ Microbiol, 61, p. 1323. , 7747954 1:CAS:528:DyaK2MXksl2lsrY%3D
  • Glienke, C., Pereira, O.L., Stringari, D., Fabris, J., Kava-Cordeiro, V., Galli-Terasawa, L., Cunnington, J., Crous, P.W., Endophytic and pathogenic Phyllosticta species, with reference to those associated with Citrus Black Spot (2011) Persoonia, 26, pp. 47-56. , 22025803 1:STN:280:DC%2BC3MbjvVWitQ%3D%3D
  • González, V., Tello, M.L., The endophytic mycota associated with Vitis vinifera in central Spain (2011) Fungal Divers, 47, pp. 29-42
  • Hall, T.A., BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT (1999) Nucleic Acids Symposium Series, pp. 95-98
  • Hawksworth, D.L., Kirk, P.M., Sutton, B.C., Pegler, D.N., (1995) Ainsworth & Bisby's Dictionary of the Fungi, , (Eighth Edition). CAB International
  • Hibbett, D.S., Binder, M., Bischoff, J.F., Blackwell, M., Cannon, P.F., Eriksson, O.E., Huhndorf, S., Zhang, N., A higher-level phylogenetic classification of the Fungi (2007) Mycological Research, 111 (5), pp. 509-547. , DOI 10.1016/j.mycres.2007.03.004, PII S0953756207000615
  • Hillis, D.M., Bull, J.J., An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis (1993) Syst Biol, 42 (2), p. 182
  • Hsieh, W.H., Chen, C.Y., Sivanesania, a new botryosphaeriaceous ascomycete genus on Rubus from Taiwan (1994) Mycological Research, 98 (1), pp. 44-46
  • Huang, W.Y., Cai, Y.Z., Hyde, K.D., Corke, H., Sun, M., Biodiversity of endophytic fungi associated with 29 traditional Chinese medicinal plants (2008) Fungal Divers, 33, pp. 61-75
  • Huelsenbeck, J.P., Ronquist, F., MRBAYES: Bayesian inference of phylogenetic trees (2001) Bioinformatics, 17 (8), pp. 754-755
  • Hyde, K.D., Chomnunti, P., Crous, P.W., Groenewald, J.Z., Damm, U., Ko-Ko, T.W., Shivas, R.G., Tan, Y.P., A case for re-inventory of Australia's plant pathogens (2010) Persoonia, 25, pp. 50-60. , 21339966 1:STN:280:DC%2BC3M3htVSnsg%3D%3D
  • Hyde, K.D., McKenzie, E.H.C., Koko, T.W., Towards incorporating anamorphic fungi in a natural classification- checklist and notes for 2010 (2011) Mycosphere, 2 (1), pp. 1-88
  • Hyde Kd, T., Genera of Ascomycetes from palms (2000) Fungal Diversity Research Series, 2, pp. 1-247
  • Jacobs, K.A., Rehner, S.A., Comparison of cultural and morphological characters and ITS sequences in anamorphs of Botryosphaeria and related taxa (1998) Mycologia, 90 (4), pp. 601-610
  • Jami, F., Slippers, B., Wingfield, M.J., Gryzenhout, M., Five new species of the Botryosphaeriaceae from Acacia karroo in South Africa (2012) Crypto Myco, , (In press)
  • Kar, A.K., Maity, M.K., Leaf-Inhabiting Pyrenomycetes of West Bengal (India) (1971) Mycologia, 63, pp. 1024-1029
  • Kirk, P., Cannon, P.F., Minter, D., Stalpers, J., (2008) Ainsworth &bisby's Dictionary of the Fungi, , (eds) 10 CAB International UK
  • Ko-Ko, T.W., Stephenson, S.L., Bahkali, A.H., Hyde, K.D., From morphology to molecular biology: Can we use sequence data to identify fungal endophytes? (2011) Fungal Divers, 50, pp. 113-120
  • Lazzizera, C., Frisullo, S., Alves, A., Lopes, J., Phillips, A.J.L., Phylogeny and morphology of Diplodia species on olives in southern Italy and description of Diplodia olivarum sp. nov (2008) Fungal Divers, 31, pp. 63-71
  • Lazzizera, C., Frisullo, S., Alves, A., Phillips, A.J.L., Morphology, phylogeny and pathogenicity of Botryosphaeria and Neofusicoccum species associated with drupe rot of olives in southern Italy (2008) Plant Pathol, 57, pp. 948-956. , 1:CAS:528:DC%2BD1cXhtlWrtb3I
  • Li, W.Y., Zhuang, W.Y., Preliminary study on relationships of Dothideales and its allies (2009) Mycosystema, 28, pp. 161-170. , 1:CAS:528:DC%2BD1MXhsVCntbzI
  • Liu, J.K., Chomnunti, P., Cai, L., Phookamsak, R., Chukeatirote, E., Jones, E.B.G., Moslem, M., Hyde, K.D., Phylogeny and morphology of Neodeightonia palmicola sp. nov. from palms (2010) Sydowia, 62, pp. 261-276
  • Liu, J.K., Phookamsak, R., Jones, E.B.G., Zhang, Y., Ko-Ko, T.W., Hu, H.L., Boonmee, S., Hyde, K.D., Astrosphaeriella is polyphyletic, with species in Fissuroma gen. nov., and Neoastrosphaeriella gen. nov (2011) Fungal Divers, 51, pp. 135-154
  • Lumbsch, H.T., Huhndorf, S.M., Myconet Volume 14: Part Two. Notes on Ascomycete Systematics. Nos. 4751-5113 (2010) Fieldiana: Life and Earth Sc NS
  • Luttrell, E.S., (1973) Loculoascomycetes, Vol. 4. The Fungi: An Advanced Treatise, , (eds) Academic New York
  • Madrid, H., Ruíz-Cendoya, M., Cano, J., Stchigel, A., Orofino, R., Guarro, J., Genotyping and in vitro antifungal susceptibility of Neoscytalidium dimidiatum isolates from different origins (2009) Int J Antimicrob Agents, 34, pp. 351-354. , 19570656 1:CAS:528:DC%2BD1MXpt1Kgtr4%3D
  • Marincowitz, S., Groenewald, J.Z., Wingfield, M.J., Crous, P.W., Species of Botryosphaeriaceae occurring on Proteaceae (2008) Persoonia, 21, pp. 111-118. , 20396581 1:STN:280:DC%2BC3c3ms12rsg%3D%3D
  • Massee, G., British pyrenomycetes (1887) Grevillea, 16, pp. 34-39
  • Miller, M.A., Pfeiffer, W., Schwartz, T., Creating the CIPRES Science Gateway for inference of large phylogenetic trees (2010) Gateway Computing Environments Workshop 2010, pp. 1-8. , (GCE)
  • Mohali, S., Slippers, B., Wingfield, M.J., Identification of botryosphaeriaceae from eucalyptus, acacia and pinus in Venezuela (2007) Fungal Divers, 25, pp. 103-125
  • Müller, E., Leptoguignardia, eine neue Gattung der bitunicaten Ascomyceten (1955) Sydowia, 9, pp. 216-220
  • Jaa, N., (2004) MrModeltest 2.0. Program Distributed by the Author, , Evolutionary Biology Centre, Uppsala University
  • Page, R.D.M., TreeView: An application to display phylogenetic trees on personal computers (1996) Comput Appl Biosci, 12, pp. 357-358. , 8902363 1:STN:280:DyaK2s%2FlvVSgtg%3D%3D
  • Pavlic, D., Slippers, B., Coutinho, T.A., Gryzenhout, M., Wingfield, M.J., Lasiodiplodia gonubiensis sp. nov., a new Botryosphaeria anamorph from native Syzygium cordatum in South Africa (2005) Studies in Mycology, 50 (2), pp. 313-322
  • Pavlic, D., Slippers, B., Coutinho, T.A., Wingfield, M.J., Multiple gene genealogies and phenotypic data reveal cryptic species of the Botryosphaeriaceae: A case study on the Neofusicoccum parvum/N. ribis complex (2009) Molecular Phylogenetics and Evolution, 51, pp. 259-268. , 19152837 1:CAS:528:DC%2BD1MXltFemtbs%3D
  • Pavlic, D., Slippers, B., Coutinho, T.A., Wingfield, M.J., Molecular and phenotypic characterisation of three phylogenetic species discovered within the Neofusicoccum parvum/N. ribis complex (2009) Mycologia, 101, pp. 636-647. , 19750943
  • Pavlic, D., Wingfield, M.J., Barber, P., Slippers, B., Hardy, G., Burgess, T.I., Seven new species of the Botryosphaeriaceae from baobab and other native trees in Western Australia (2008) Mycologia, 100, pp. 851-866. , 19202840
  • Pennycook, S., Samuels, G., Botryosphaeria and Fusicoccum species associated with ripe fruit rot of Actinidia deliciosa (kiwifruit) in New Zealand (1985) Mycotaxon, 24, pp. 445-458
  • Pérez, C.A., Wingfield, M.J., Slippers, B., Altier, N.A., Blanchette, R.A., Endophytic and canker-associated Botryosphaeriaceae occurring on non-native Eucalyptus and native Myrtaceae trees in Uruguay (2010) Fungal Divers, 41, pp. 53-69
  • Phillips, A.J.L., Alves, A., Taxonomy, phylogeny, and epitypification of Melanops tulasnei, the type species of Melanops (2009) Fungal Divers, 38, pp. 155-166
  • Phillips, A., Alves, A., Correia, A., Luque, J., Two new species of Botryosphaeria with brown, 1-septate ascospores and Dothiorella anamorphs (2005) Mycologia, 97 (2), pp. 513-529
  • Phillips, A.J.L., Alves, A., Pennycook, S.R., Johnston, P.R., Ramaley, A., Akulov, A., Crous, P.W., Resolving the phylogenetic and taxonomic status of dark-spored teleomorph genera in the Botryosphaeriaceae (2008) Persoonia, 21, pp. 29-55. , 20396576 1:STN:280:DC%2BC3c3ms12ktw%3D%3D
  • Phillips, A.J.L., Crous, P.W., Alves, A., Diplodia seriata, the anamorph of Botryosphaeria obtusa (2007) Fungal Divers, 25, pp. 141-155
  • Phillips, A.J.L., Fonseca, F., Nolasco, G., A reassessment of the anamorphic fungus Fusicoccum luteum and description of its teleomorph Botryosphaeria lutea sp. nov (2002) Sydowia, 54 (1), pp. 59-77
  • Phillips, A.J.L., Oudemans, P.V., Correia, A., Alves, A., Characterisation and epitypification of Botryosphaeria corticis, the cause of blueberry cane canker (2006) Fungal Diversity, 21, pp. 141-155
  • Phillips, A.J.L., Pennycook, S.R., Taxonomy of Botryosphaeria melanops and its anamorph Fusicoccum advenum (2004) Sydowia, 56, pp. 68-75
  • Punithalingam, E., Studies on Sphaeropsidales in culture (1969) Mycological Papers, 119, pp. 1-24
  • Punithalingam, E., Plant diseases attributed to Botryodiplodia theobromae Pat (1980) J. Cramer, , Vaduz
  • Ramesh, C., A new species of Vestergrenia, V. ixorae from Maharashtra (1988) Indian Botanical Reporter, 7, pp. 105-106
  • Rannala, B., Yang, Z., Probability distribution of molecular evolutionary trees: A new method of phylogenetic inference (1996) Journal of Molecular Evolution, 43 (3), pp. 304-311
  • Rehm, H., Beiträge zur Pilzflora von Südamerika. XII. Sphaeriales (1901) Hedwigia, 40, pp. 100-124
  • Rojas, E.I., Herre, E.A., Mejia, L.C., Arnold, A.E., Chaverri, P., Samuels, G.J., Endomelanconiopsis, a new anamorph genus in the Botryosphaeriaceae (2008) Mycologia, 100, pp. 760-775. , 18959162
  • Romero, A.I., Carmarán, C., Algunos micromicetes xilófilos de la región subtropical Argentina. I. Misiones (1997) Boletín Sociedad Argentina Botánica, 33, pp. 59-67
  • Ronquist, F., Huelsenbeck, J.P., MrBayes 3: Bayesian phylogenetic inference under mixed models (2003) Bioinformatics, 19 (12), p. 1572. , 12912839 1:CAS:528:DC%2BD3sXntlKms7k%3D
  • Saccardo, P.A., Fungi veneti novi vel critici vel Mycologiae Venetae addendi (1877) Michelia, pp. 1-72
  • Sakalidis, M.L., Hardy, G., Burgess, T.I., Use of the Genealogical Sorting Index (GSI) to delineate species boundaries in the Neofusicoccum parvum-Neofusicoccum ribis species complex (2011) Molecular Phylogenetics and Evolution, 60 (320), pp. 333-344. , 21575732
  • Sakayaroj, J., Preedanon, S., Supaphon, O., Jones, E.B.G., Phongpaichit, S., Phylogenetic diversity of endophyte assemblages associated with the tropical seagrass Enhalus acoroides in Thailand (2010) Fungal Divers, 42, pp. 27-45
  • Schoch, C.L., Crous, P.W., Groenewald, J.Z., Boehm, E.W.A., Burgess, T.I., De Gruyter, J., De Hoog, G.S., Spatafora, J.W., A class-wide phylogenetic assessment of Dothideomycetes (2009) Stud Mycol, 64, pp. 1-15. , 20169021 1:STN:280:DC%2BC3c7hvFeksQ%3D%3D
  • Schoch, C.L., Shoemaker, R.A., Seifert, K.A., Hambleton, S., Spatafora, J.W., Crous, P.W., A multigene phylogeny of the Dothideomycetes using four nuclear loci (2006) Mycologia, 98 (6), pp. 1041-1052. , http://www.mycologia.org/cgi/reprint/98/6/1041
  • Schoch, C.L., Sung, G.H., López-Giráldez, F., Townsend, J.P., Miadlikowska, J., Hofstetter, V., Robbertse, B., Spatafora, J.W., The Ascomycota tree of life: A phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits (2009) Syst Biol, 58, pp. 224-239. , 20525580 1:CAS:528:DC%2BD1MXhtFSqsbzO
  • Shoemaker, R.A., Conidial states of some Botryosphaeria species on Vitis and Quercus (1964) Can J Bot, 42 (9), pp. 1297-1303
  • Sivanesan, A., Redisposition and descriptions of some Amphisphaeria species and a note on Macrovalsaria (1975) Trans Br Mycol Soc, 65, pp. 395-402
  • Sivanesan, A., The bitunicate ascomycetes and their anamorphs (1984) J. Cramer
  • Slippers, B., Burgess, T., Wingfield, B.D., Crous, P.W., Coutinho, T.A., Wingfield, M.J., Development of simple sequence repeat markers for Botryosphaeria spp. with Fusicoccum anamorphs (2004) Molecular Ecology Notes, 4 (4), pp. 675-677. , DOI 10.1111/j.1471-8286.2004.00780.x
  • Slippers, B., Crous, P.W., Denman, S., Coutinho, T.A., Wingfield, B.D., Wingfield, M.J., Combined multiple gene genealogies and phenotypic characters differentiate several species previously identified as Botryosphaeria dothidea (2004) Mycologia, 96 (1), pp. 83-101
  • Slippers, B., Fourie, G., Crous, P.W., Coutinho, T.A., Wingfield, B.D., Carnegie, A.J., Wingfield, M.J., Speciation and distribution of Botryosphaeria spp. on native and introduced Eucalyptus trees in Australia and South Africa (2005) Studies in Mycology, 50 (2), pp. 343-358
  • Slippers, B., Fourie, G., Crous, P.W., Coutinho, T.A., Wingfield, B.D., Wingfield, M.J., Multiple gene sequences delimit Botryosphaeria australis sp. nov. from B. lutea (2004) Mycologia, 96 (5), pp. 1030-1041
  • Slippers, B., Smit, W.A., Crous, P.W., Coutinho, T.A., Wingfield, B.D., Wingfield, M.J., Taxonomy, phylogeny and identification of Botryosphaeriaceae associated with pome and stone fruit trees in South Africa and other regions of the world (2007) Plant Pathology, 56 (1), pp. 128-139. , DOI 10.1111/j.1365-3059.2006.01486.x
  • Slippers, B., Wingfield, M.J., Botryosphaeriaceae as endophytes and latent pathogens of woody plants: Diversity, ecology and impact (2007) Fungal Biology Reviews, 21 (2-3), pp. 90-106. , DOI 10.1016/j.fbr.2007.06.002, PII S1749461307000309, Fungal Endophytes
  • Smith, H., Crous, P.W., Wingfield, M.J., Coutinho, T.A., Wingfield, B.D., Botryosphaeria eucalyptorum sp. nov., a new species in the B. dothidea-complex on Eucalyptus in South Africa (2001) Mycologia, pp. 277-285
  • Smith, H., Wingfield, M.J., Crous, P.W., Coutinho, T.A., Sphaeropsis sapinea and Botryosphaeria dothidea endophytic in Pinus spp. and Eucalyptus spp. in South Africa (1996) South African Journal of Botany, 62, pp. 86-88
  • Spegazzini, C., Hongos de la Yerba Mate (1908) Anales Museo Nacional de Buenos Aires, 17, pp. 111-141
  • Stamatakis, A., RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models (2006) Bioinformatics, 22 (21), pp. 2688-2690. , DOI 10.1093/bioinformatics/btl446
  • Stamatakis, A., Hoover, P., Rougemont, J., A Rapid Bootstrap Algorithm for the RAxML Web Servers (2008) Syst Biol, 57, pp. 758-771. , 18853362
  • Stevens, N.E., Two species of Physalospora on Citrus and other hosts (1926) Mycologia, 18, pp. 206-217
  • Stevens, N.E., Two species of Physalospora in England (1936) Mycologia, 28 (4), pp. 330-336
  • Suetrong, S., Schoch, C.L., Spatafora, J.W., Kohlmeyer, J., Volkmann-Kohlmeyer, B., Sakayaroj, J., Phongpaichit, S., Jones, E.B.G., Molecular systematics of the marine Dothideomycetes (2009) Stud Mycol, 64, pp. 155-173. , 20169029 1:STN:280:DC%2BC3c7hvFersw%3D%3D
  • Summerell, B.A., Laurence, M.H., Liew, E.C.Y., Leslie, J.F., Biogeography and phylogeography of Fusarium: A review (2010) Fungal Divers, 44, pp. 3-13
  • Summerell, B.A., Leslie, J.F., Liew, E.C.Y., Laurence, M.H., Bullock, S., Petrovic, T., Bentley, A.R., Walsh, J.L., Fusarium species associated with plants in Australia (2011) Fungal Divers, 46, pp. 1-27
  • Swofford, D.L., (2002) PAUP: Phylogenetic Analysis Using Parsimony, Version 4.0 b10, , Sinauer Associates Sunderland MA
  • Sydow, H., Beiträge zur Kenntnis der Pilzflora des südlichen Ostindiens - II (1914) Ann Mycol, 12 (5), pp. 484-490
  • Theissen, F., Sydow, H., Die Dothideales (1915) Ann Mycol, 113, pp. 149-746
  • Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., Higgins, D.G., The CLUSTAL-X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools (1997) Nucleic Acids Res, 25 (24), p. 4876. , 9396791 1:CAS:528:DyaK1cXntFyntQ%3D%3D
  • Tulasne, L.R., Note sur l'appareil reproducteur multiple des Hypoxylées (DC.) ou Pyrénomycètes (Fr.) (1856) Annales des Sciences Naturelles Botanique, 5
  • Ulloa, M., Hanlin, R.T., Illustrated dictionary of mycology (2000) American Phytopathological Society, , (APS Press)
  • Urbez-Torres, J.R., Peduto, F., Striegler, R.K., Urrea-Romero, K.E., Rupe, J.C., Cartwright, R.D., Gubler, W.D., Characterization of fungal pathogens associated with grapevine trunk diseases in Arkansas and Missouri (2012) Fungal Divers, 52, pp. 169-189
  • Vilgalys, R., Hester, M., Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species (1990) Journal of Bacteriology, 172 (8), pp. 4238-4246
  • Von Arx, J., Müller, E., Die Gattungen der amerosporen Pyrenomyceten (1954) Beitrage Zur Kryptogamenflora der Schweiz, 11 (1), pp. 1-434
  • Von Arx, J.A., Plant pathogenic fungi (1987) J Cramer, (87), p. 288
  • Von Arx, J.A., Müller, E., A re-evaluation of the bitunicate ascomycetes with keys to families and genera (1975) Stud Mycol, 9, pp. 1-159
  • Von Höhnel, F., Fragmente zur Mykologie (1909) Sitzungsb Kaiserl Akad Wiss, Math-Naturwiss Kl, 118, pp. 813-904
  • Wakefield, E.M., Fungi exotici 26 (1922) Kew Bulletin of Miscellaneous Information, pp. 161-165
  • White, T., Bruns, T., Lee, S., Taylor, J., Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics (1990) PCR Protocols: A Guide To Methods and Applications, 18, pp. 315-322
  • Wijayawardene, D.N.N., McKenzie, E.H.C., Hyde, K.D., Towards incorporating anamorphic fungi in a natural classification - Checklist and notes for 2011 (2012) Mycosphere, 3 (2), pp. 157-222
  • Wikee, S., Udayanga, D., Crous, P.W., Chukeatirote, E., McKenzie, E.H.C., Bahkali, A.H., Dai, D.Q., Hyde, K.D., Phyllostictaan overview of current status of species recognition (2011) Fungal Divers, 51, pp. 43-61
  • Wikee, S., Wulandari, N.F., McKenzie, E.H.C., Hyde, K.D., Phyllosticta ophiopogonis sp. nov. from Ophiopogon japonicus (Liliaceae) (2011) Saudi Journal of Biological Sciences, 19 (2), pp. 13-16
  • Winter, G., (1887) Ascomyceten: Gymnoasceen und Pyrenomyceten
  • Wong, M.H., Crous, P.W., Henderson, J., Groenewald, J.Z., Drenth, A., Phyllosticta species associated with freckle disease of banana (2012) Fungal Divers, 56, pp. 173-187
  • Wu, H.X., Schoch, C.L., Boonmee, S., Bahkali, A.H., Chomnunti, P., Hyde, K.D., A reappraisal of Microthyriaceae (2011) Fungal Divers, 51, pp. 189-248. , 22408574
  • Wulandari, N.F., To-Anun, C., Hyde, K.D., Duong, L.M., De Gruyter, J., Meffert, J.P., Groenewald, J.Z., Crous, P.W., Phyllosticta citriasiana sp. nov., the cause of Citrus tan spot of Citrus maxima in Asia (2009) Fungal Divers, 34, pp. 23-39
  • Zhang, Y., Crous, P.W., Schoch, C.L., Hyde, K.D., Pleosporales (2012) Fungal Divers, 53, pp. 1-221. , 1:CAS:528:DC%2BC38Xht1aisbvE
  • Zhaxybayeva, O., Gogarten, J.P., Bootstrap, Bayesian probability and maximum likelihood mapping: Exploring new tools for comparative genome analyses (2002) BMC Genomics, 3 (1), p. 4. , 11918828
  • Zhou, S., Stanosz, G.R., Relationships among Botryosphaeria species and associated anamorphic fungi inferred from the analyses of ITS and 5.8S rDNA sequences (2001) Mycologia, 93 (3), pp. 516-527
  • Zhou, X.D., Xie, Y.J., Chen, S.F., Wingfield, M.J., Diseases of eucalypt plantations in China: Challenges and opportunities (2008) Fungal Divers, 32, pp. 1-7. , 1:CAS:528:DC%2BD1cXmvVSjsbY%3D

Citas:

---------- APA ----------
Liu, J.-K., Phookamsak, R., Doilom, M., Wikee, S., Li, Y.-M., Ariyawansha, H., Boonmee, S.,..., Hyde, K.D. (2012) . Towards a natural classification of Botryosphaeriales. Fungal Diversity, 57(1), 149-210.
http://dx.doi.org/10.1007/s13225-012-0207-4
---------- CHICAGO ----------
Liu, J.-K., Phookamsak, R., Doilom, M., Wikee, S., Li, Y.-M., Ariyawansha, H., et al. "Towards a natural classification of Botryosphaeriales" . Fungal Diversity 57, no. 1 (2012) : 149-210.
http://dx.doi.org/10.1007/s13225-012-0207-4
---------- MLA ----------
Liu, J.-K., Phookamsak, R., Doilom, M., Wikee, S., Li, Y.-M., Ariyawansha, H., et al. "Towards a natural classification of Botryosphaeriales" . Fungal Diversity, vol. 57, no. 1, 2012, pp. 149-210.
http://dx.doi.org/10.1007/s13225-012-0207-4
---------- VANCOUVER ----------
Liu, J.-K., Phookamsak, R., Doilom, M., Wikee, S., Li, Y.-M., Ariyawansha, H., et al. Towards a natural classification of Botryosphaeriales. Fungal Diversity. 2012;57(1):149-210.
http://dx.doi.org/10.1007/s13225-012-0207-4