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Csonka, G.I.; French, A.D.; Johnson, G.P.; Stortz, C.A. "Evaluation of density functionals and basis sets for carbohydrates" (2009) Journal of Chemical Theory and Computation. 5(4):679-692
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Abstract:

Correlated ab initio wave function calculations using MP2/aug-cc-pVTZ model chemistry have been performed for three test sets of gas phase saccharide conformations to provide reference values for their relative energies. The test sets consist of 15 conformers of Rand β-D-allopyranose, 15 of 3,6-anhydro-4-O-methyl-D-galactitol, and four of β-D-glucopyranose. For each set, conformational energies varied by about 7 kcal/mol. Results obtained with the Hartree-Fock method, with pure density functional approximations (DFAs) like LSDA, PBEsol, PBE, and TPSS and with hybrid DFAs like B3PW91, B3LYP, PBEh, and M05-2X, were then compared to the reference and local MP2 relative energies. Basis sets included 6-31G*, 6-31G**, 6-31+G*, 6-31+G**, 6-311+G**, 6-311++G**, cc-pVTZ(-f), cc-pVTZ, and augcc-pVTZ(-f). The smallest basis set that gives good DFA relative energies is 6-31+G**, and more converged results can be obtained with 6-311+G**. The optimized geometries obtained from a smaller basis set, 6-31+G*, were useful for subsequent single point energy calculations with larger basis sets. The best agreement with MP2 was shown by M05-2X, but only when using a dense DFT grid. The popular B3LYP functional is not the best for saccharide conformational studies. The B3PW91 functional gives systematically better results, but other hybrid functionals like PBEh or TPSSh are even better. Overall, the nonempirical PBE GGA and TPSS meta-GGA functionals also performed better than B3LYP. © 2009 American Chemical Society.

Registro:

Documento: Artículo
Título:Evaluation of density functionals and basis sets for carbohydrates
Autor:Csonka, G.I.; French, A.D.; Johnson, G.P.; Stortz, C.A.
Filiación:Department of Inorganic and Analytical Chemistry, Budapest University of Technology, Szent Gellért tér 4, Budapest, H-1521 Hungary, Hungary
Southern Regional Research Center, U.S. Department of Agriculture, 1100 Robert E. Lee BouleVard, New Orleans, LA 70124, United States
Departamento de Química, Orgánica-CIHIDECAR, Universidad de Buenos Aires, Ciudad Universitaria, 1428 Buenos Aires, Argentina
Año:2009
Volumen:5
Número:4
Página de inicio:679
Página de fin:692
DOI: http://dx.doi.org/10.1021/ct8004479
Título revista:Journal of Chemical Theory and Computation
Título revista abreviado:J. Chem. Theory Comput.
ISSN:15499618
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_15499618_v5_n4_p679_Csonka

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Citas:

---------- APA ----------
Csonka, G.I., French, A.D., Johnson, G.P. & Stortz, C.A. (2009) . Evaluation of density functionals and basis sets for carbohydrates. Journal of Chemical Theory and Computation, 5(4), 679-692.
http://dx.doi.org/10.1021/ct8004479
---------- CHICAGO ----------
Csonka, G.I., French, A.D., Johnson, G.P., Stortz, C.A. "Evaluation of density functionals and basis sets for carbohydrates" . Journal of Chemical Theory and Computation 5, no. 4 (2009) : 679-692.
http://dx.doi.org/10.1021/ct8004479
---------- MLA ----------
Csonka, G.I., French, A.D., Johnson, G.P., Stortz, C.A. "Evaluation of density functionals and basis sets for carbohydrates" . Journal of Chemical Theory and Computation, vol. 5, no. 4, 2009, pp. 679-692.
http://dx.doi.org/10.1021/ct8004479
---------- VANCOUVER ----------
Csonka, G.I., French, A.D., Johnson, G.P., Stortz, C.A. Evaluation of density functionals and basis sets for carbohydrates. J. Chem. Theory Comput. 2009;5(4):679-692.
http://dx.doi.org/10.1021/ct8004479