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Calabrese, A.; Fraiman, D.; Zysman, D.; Ponce Dawson, S. "Stochastic fire-diffuse-fire model with realistic cluster dynamics" (2010) Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 82(3)
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Abstract:

Living organisms use waves that propagate through excitable media to transport information. Ca2 + waves are a paradigmatic example of this type of processes. A large hierarchy of Ca2 + signals that range from localized release events to global waves has been observed in Xenopus laevis oocytes. In these cells, Ca2 + release occurs trough inositol 1,4,5-trisphosphate receptors (IP 3 Rs) which are organized in clusters of channels located on the membrane of the endoplasmic reticulum. In this article we construct a stochastic model for a cluster of IP 3 R 's that replicates the experimental observations reported in. We then couple this phenomenological cluster model with a reaction-diffusion equation, so as to have a discrete stochastic model for calcium dynamics. The model we propose describes the transition regimes between isolated release and steadily propagating waves as the IP 3 concentration is increased. © 2010 The American Physical Society.

Registro:

Documento: Artículo
Título:Stochastic fire-diffuse-fire model with realistic cluster dynamics
Autor:Calabrese, A.; Fraiman, D.; Zysman, D.; Ponce Dawson, S.
Filiación:Departamento de Física, FCEN-UBA, Ciudad Universitaria, Pabellón I, 1428 Buenos Aires, Argentina
Center for Theoretical Neuroscience, Columbia University, 1051 Riverside Drive, New York, NY 10032, United States
Departamento de Matemática y Ciencias, Universidad de San Andrés, Buenos Aires, Argentina
Department of Biology and Centre for Neural Dynamics, University of Ottawa, 30 Marie-Curie, Ottawa, ON K1N 6N5, Canada
Palabras clave:Calcium dynamics; Cluster dynamics; Cluster models; Discrete stochastic models; Endoplasmic reticulum; Excitable media; Experimental observation; Fire-diffuse-fire models; Living organisms; Reaction diffusion equations; Transition regimes; Xenopus laevis oocytes; Biology; Linear equations; Stochastic systems; Sugars; Stochastic models
Año:2010
Volumen:82
Número:3
DOI: http://dx.doi.org/10.1103/PhysRevE.82.031910
Título revista:Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
Título revista abreviado:Phys. Rev. E Stat. Nonlinear Soft Matter Phys.
ISSN:15393755
CODEN:PLEEE
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_15393755_v82_n3_p_Calabrese

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Citas:

---------- APA ----------
Calabrese, A., Fraiman, D., Zysman, D. & Ponce Dawson, S. (2010) . Stochastic fire-diffuse-fire model with realistic cluster dynamics. Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 82(3).
http://dx.doi.org/10.1103/PhysRevE.82.031910
---------- CHICAGO ----------
Calabrese, A., Fraiman, D., Zysman, D., Ponce Dawson, S. "Stochastic fire-diffuse-fire model with realistic cluster dynamics" . Physical Review E - Statistical, Nonlinear, and Soft Matter Physics 82, no. 3 (2010).
http://dx.doi.org/10.1103/PhysRevE.82.031910
---------- MLA ----------
Calabrese, A., Fraiman, D., Zysman, D., Ponce Dawson, S. "Stochastic fire-diffuse-fire model with realistic cluster dynamics" . Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, vol. 82, no. 3, 2010.
http://dx.doi.org/10.1103/PhysRevE.82.031910
---------- VANCOUVER ----------
Calabrese, A., Fraiman, D., Zysman, D., Ponce Dawson, S. Stochastic fire-diffuse-fire model with realistic cluster dynamics. Phys. Rev. E Stat. Nonlinear Soft Matter Phys. 2010;82(3).
http://dx.doi.org/10.1103/PhysRevE.82.031910