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Abstract:

The genus Coprothermobacter (initially named Thermobacteroides) is currently placed within the phylum Firmicutes. Early 16S rRNA gene based phylogenetic studies pointed out the great differences between Coprothermobacter and other members of the Firmicutes, revealing that it constitutes a new deep branching lineage. Over the years, several studies based on 16S rRNA gene and whole genome sequences have indicated that Coprothermobacter is very distant phylogenetically to all other bacteria, supporting its placement in a distinct deeply rooted novel phylum. In view of this, we propose its allocation to the new family Coprothermobacteraceae within the novel order Coprothermobacterales, the new class Coprothermobacteria, and the new phylum Coprothermobacterota, and an emended description of the family Thermodesulfobiaceae. © 2018 IUMS.

Registro:

Documento: Artículo
Título:Proposal for a new classification of a deep branching bacterial phylogenetic lineage: Transfer of Coprothermobacter proteolyticus and Coprothermobacter platensis to Coprothermobacteraceae fam. nov., within Coprothermobacterales ord. nov., Coprothermobacteria classis nov. and Coprothermobacterota phyl. nov. and emended description of the family Thermodesulfobiaceae
Autor:Pavan, M.E.; Pavan, E.E.; Glaeser, S.P.; Etchebehere, C.; Kämpfer, P.; Pettinari, M.J.; López, N.I.
Filiación:Departamento de Química Biológica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina
Biomedical Technologies Laboratory, Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy
Institut für Angewandte Mikrobiologie, Universität Giessen, Giessen, Germany
Microbial Ecology Laboratory, Department of Biochemistry and Microbial Genetics, Biological Research Institute ‘Clemente Estable’, Montevideo, Uruguay
IQUIBICEN-CONICET, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina
Palabras clave:Coprothermobacter platensis; Coprothermobacter proteolyticus; Coprothermobacterales; Coprothermobacterota; Deep branch lineage; RNA 16S; bacterial DNA; archaeon; Article; bacterial genome; bacterium isolation; Bacteroides; Coprothermobacter platensis; Coprothermobacter proteolyticus; Crenarchaeota; Dictyoglomi; Euryarchaeota; gene sequence; phylogenetic tree; phylogenomics; priority journal; Thermotogae; bacterium identification; classification; DNA sequence; Firmicutes; genetics; phylogeny; Bacterial Typing Techniques; DNA, Bacterial; Firmicutes; Phylogeny; RNA, Ribosomal, 16S; Sequence Analysis, DNA
Año:2018
Volumen:68
Número:5
Página de inicio:1627
Página de fin:1632
DOI: http://dx.doi.org/10.1099/ijsem.0.002720
Título revista:International Journal of Systematic and Evolutionary Microbiology
Título revista abreviado:Int. J. Syst. Evol. Microbiol.
ISSN:14665026
CODEN:ISEMF
CAS:DNA, Bacterial; RNA, Ribosomal, 16S
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_14665026_v68_n5_p1627_Pavan

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Citas:

---------- APA ----------
Pavan, M.E., Pavan, E.E., Glaeser, S.P., Etchebehere, C., Kämpfer, P., Pettinari, M.J. & López, N.I. (2018) . Proposal for a new classification of a deep branching bacterial phylogenetic lineage: Transfer of Coprothermobacter proteolyticus and Coprothermobacter platensis to Coprothermobacteraceae fam. nov., within Coprothermobacterales ord. nov., Coprothermobacteria classis nov. and Coprothermobacterota phyl. nov. and emended description of the family Thermodesulfobiaceae. International Journal of Systematic and Evolutionary Microbiology, 68(5), 1627-1632.
http://dx.doi.org/10.1099/ijsem.0.002720
---------- CHICAGO ----------
Pavan, M.E., Pavan, E.E., Glaeser, S.P., Etchebehere, C., Kämpfer, P., Pettinari, M.J., et al. "Proposal for a new classification of a deep branching bacterial phylogenetic lineage: Transfer of Coprothermobacter proteolyticus and Coprothermobacter platensis to Coprothermobacteraceae fam. nov., within Coprothermobacterales ord. nov., Coprothermobacteria classis nov. and Coprothermobacterota phyl. nov. and emended description of the family Thermodesulfobiaceae" . International Journal of Systematic and Evolutionary Microbiology 68, no. 5 (2018) : 1627-1632.
http://dx.doi.org/10.1099/ijsem.0.002720
---------- MLA ----------
Pavan, M.E., Pavan, E.E., Glaeser, S.P., Etchebehere, C., Kämpfer, P., Pettinari, M.J., et al. "Proposal for a new classification of a deep branching bacterial phylogenetic lineage: Transfer of Coprothermobacter proteolyticus and Coprothermobacter platensis to Coprothermobacteraceae fam. nov., within Coprothermobacterales ord. nov., Coprothermobacteria classis nov. and Coprothermobacterota phyl. nov. and emended description of the family Thermodesulfobiaceae" . International Journal of Systematic and Evolutionary Microbiology, vol. 68, no. 5, 2018, pp. 1627-1632.
http://dx.doi.org/10.1099/ijsem.0.002720
---------- VANCOUVER ----------
Pavan, M.E., Pavan, E.E., Glaeser, S.P., Etchebehere, C., Kämpfer, P., Pettinari, M.J., et al. Proposal for a new classification of a deep branching bacterial phylogenetic lineage: Transfer of Coprothermobacter proteolyticus and Coprothermobacter platensis to Coprothermobacteraceae fam. nov., within Coprothermobacterales ord. nov., Coprothermobacteria classis nov. and Coprothermobacterota phyl. nov. and emended description of the family Thermodesulfobiaceae. Int. J. Syst. Evol. Microbiol. 2018;68(5):1627-1632.
http://dx.doi.org/10.1099/ijsem.0.002720