Artículo

Este artículo es de Acceso Abierto y puede ser descargado en su versión final desde nuestro repositorio
Consulte el artículo en la página del editor
Consulte la política de Acceso Abierto del editor

Abstract:

In order to assess the relationship between the genus Kluyvera and other members of the family Enterobacteriaceae, the 16S rRNA genes of type strains of the recognized Kluyvera species, Kluyvera georgiana, Kluyvera cochleae, Kluyvera ascorbata and Kluyvera cryocrescens, were sequenced. A comparative phylogenetic analysis based on these 16S rRNA gene sequences and those available for strains belonging to several genera of the family Enterobacteriaceae showed that members of the genus Kluyvera form a cluster that contains all the known Kluyvera species. However, the type strain of Enterobacter intermedius (ATCC 33110 T ) was included within this cluster in a very close relationship with the type strain of K. cochleae (ATCC 51609 T ). In addition to the phylogenetic evidence, biochemical and DNA-DNA hybridization analyses of species within this cluster indicated that the type strain of E. intermedius is in fact a member of the genus Kluyvera and, within it, of the species Kluyvera cochleae. Therefore, following the current rules for bacterial nomenclature and classification, the transfer of E. intermedius to the genus Kluyvera as Kluyvera intermedia comb. nov. is proposed (type strain, ATCC 33110 T =CIP 79.27 T =LMG 2785 T =CCUG 14183 T ). Biochemical analysis of four E. intermedius strains and one K. cochleae strain independent of the respective type strains further indicated that E. intermedius and K. cochleae represent the same species and are therefore heterotypic synonyms. Nomenclatural priority goes to the oldest legitimate epithet. Consequently, Kluyvera cochleae Müller et al. 1996 is a later synonym of Kluyvera intermedia (Izard et al. 1980) Pavan et al. 2005. © 2005 IUMS.

Registro:

Documento: Artículo
Título:Phylogenetic relationships of the genus Kluyvera: Transfer of Enterobacter intermedius Izard et al. 1980 to the genus Kluyvera as Kluyvera intermedia comb. nov. and reclassification of Kluyvera cochleae as a later synonym of K. intermedia
Autor:Pavan, M.E.; Franco, R.J.; Rodriguez, J.M.; Gadaleta, P.; Abbott, S.L.; Janda, J.M.; Zorzópulos, J.
Filiación:Inst. Invest. Biomed. Fund. Pablo, Saladillo 2452, Buenos Aires 1440, Argentina
Departamento de Quimica Biologica, Fac. de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina
Microbial Diseases Laboratory, Div. of Communicable Disease Control, California Dept. of Health Services, Richmond, CA, United States
Palabras clave:bacterial DNA; RNA 16S; article; bacterial strain; biochemistry; classification; controlled study; DNA DNA hybridization; Enterobacter intermedius; Enterobacteriaceae; gene sequence; genus; Kluyvera; kluyvera ascorbata; Kluyvera cochleae; Kluyvera cryocrescens; Kluyvera georgiana; Kluyvera intermedia; nomenclature; nonhuman; nucleotide sequence; phylogeny; priority journal; species identification; strain difference; Bacterial Typing Techniques; DNA, Bacterial; DNA, Ribosomal; Enterobacter; Enterobacteriaceae; Kluyvera; Molecular Sequence Data; Nucleic Acid Hybridization; Phenotype; Phylogeny; RNA, Ribosomal, 16S; Sequence Analysis, DNA; Terminology; Bacteria (microorganisms); Enterobacter; Enterobacter intermedius; Enterobacteriaceae; Kluyvera; Kluyvera ascorbata; Kluyvera cochleae; Kluyvera cryocrescens; Kluyvera georgiana
Año:2005
Volumen:55
Número:1
Página de inicio:437
Página de fin:442
DOI: http://dx.doi.org/10.1099/ijs.0.63071-0
Título revista:International Journal of Systematic and Evolutionary Microbiology
Título revista abreviado:Int. J. Syst. Evol. Microbiol.
ISSN:14665026
CODEN:ISEMF
CAS:DNA, Bacterial; DNA, Ribosomal; RNA, Ribosomal, 16S
PDF:https://bibliotecadigital.exactas.uba.ar/download/paper/paper_14665026_v55_n1_p437_Pavan.pdf
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_14665026_v55_n1_p437_Pavan

Referencias:

  • Abbott, S.L., Cheung, W.K.W., Kroske-Bystrom, S., Malekzadeh, T., Janda, J.M., Identification of Aeromonas strains to genospecies level in the clinical laboratory (1992) J. Clin. Microbiol., 30, pp. 1262-1266
  • Abbott, S.L., Cheung, W.K.W., Janda, J.M., The genus Aeromonas: Biochemical characteristics, atypical reactions, and phenotypic identification schemes (2003) J. Clin. Microbiol., 41, pp. 2348-2357
  • Drancourt, M., Bollet, C., Carta, A., Rousselier, P., Phylogenetic analyses of Klebsiella species delineate Klebsiella and Raoultella gen. nov., with description of Raoultella ornithinolytica comb. nov., Raoultella terrigena comb. nov. and Raoultella planticola comb. nov (2001) Int. J. Syst. Evol. Microbiol., 51, pp. 925-932
  • Farmer III, J.J., Fanning, G.R., Huntley-Carter, G.P., Holmes, B., Hickman, F.W., Richard, C., Brenner, D.J., Kluyvera, a new (redefined) genus in the family Enterobacteriaceae: Identification of Kluyvera ascorbata sp. nov. and Kluyvera cryocrescens sp. nov. in clinical specimens (1981) J. Clin. Microbiol., 13, pp. 919-933
  • Felsenstein, J., PHYLIP - Phylogeny inference package (1989) Cladistics, 5, pp. 164-166. , (version 3.2)
  • Galtier, N., Gouy, M., Gautier, C., SEAVIEW and PHYLO_WIN: Two graphic tools for sequence alignment and molecular phylogeny (1996) Comput. Appl. Biosci., 12, pp. 543-548
  • Harada, H., Ishikawa, H., Phylogenetical relationship based on groE genes among phenotypically related Enterobacter, Pantoea, Klebsiella, Serratia and Erwinia species (1997) J. Gen. Appl. Microbiol., 43, pp. 355-361
  • Holt, J.G., Krieg, N.R., Sneath, P.H.A., Staley, J.T., Williams, S.T., (1994) Bergey's Manual of Determinative Bacteriology, , 9th edn. Williams & Wilkins
  • Izard, D., Gavini, F., Leclerc, H., Polynucleotide sequence relatedness and genome size among Enterobacter intermedium sp. nov. and the species Enterobacter cloacae and Klebsiella pneumoniae (1980) Zentralbl Bakteriol Parasitenkd Infektionskr Hyg Abt 1 Orig Reihe C, 1, pp. 51-60
  • Janda, J.M., Abbott, S.L., Khashe, S., Kellogg, G.H., Shimada, T., Further studies on biochemical characteristics and serological properties of the genus Aeromonas (1996) J. Clin. Microbiol., 34, pp. 1930-1933
  • Johnson, J.L., DNA reassociation experiments (1991) Nucleic Acid Techniques in Bacterial Systematics, p. 329. , Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley
  • Maidak, B.L., Olsen, G.J., Larsen, N., Overbeek, R., McCaughey, M.J., Woese, C.R., The RDP (Ribosomal Database Project) (1997) Nucleic Acids Res., 25, pp. 109-111
  • Müller, H.E., Brenner, D.J., Fanning, G.R., Grimont, P.A.D., Kämpfer, P., Emended description of Buttiauxella agrestis with recognition of six new species of Buttiauxella and two species of Kluyvera: Buttiauxella ferragutiae sp. nov., Buttiauxella gaviniae sp. nov., Buttiauxella brennerae sp. nov., Buttiauxella izardii sp. nov., Buttiauxella noackiae sp. nov., Buttiauxella warmboldiae sp. nov., Kluyvera cochleae sp. nov., and Kluyvera georgiana sp. nov (1996) Int. J. Syst. Bacteriol., 46, pp. 50-63
  • Sambrook, J., Fritsch, E.F., Maniatis, T., (1989) Molecular Cloning. A Laboratory Manual, , 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
  • Spröer, C., Mendrock, U., Swiderski, J., Lang, E., Stackebrandt, E., The phylogenetic position of Serratia, Buttiauxella and some other genera of the family Enterobacteriaceae (1999) Int. J. Syst. Bacteriol., 49, pp. 1433-1438
  • Stackebrandt, E., Goebel, B.M., Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology (1994) Int. J. Syst. Bacteriol., 44, pp. 846-849
  • Thompson, J.D., Higgins, D.G., Gibson, T.J., CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice (1994) Nucleic Acids Res., 22, pp. 4673-4680
  • Wayne, L.G., Brenner, D.J., Colwell, R.R., Report of the ad hoc committee on reconciliation of approaches to bacterial systematics (1987) Int. J. Syst. Bacteriol., 37, pp. 463-464. , 9 other authors International Committee on Systematic Bacteriology

Citas:

---------- APA ----------
Pavan, M.E., Franco, R.J., Rodriguez, J.M., Gadaleta, P., Abbott, S.L., Janda, J.M. & Zorzópulos, J. (2005) . Phylogenetic relationships of the genus Kluyvera: Transfer of Enterobacter intermedius Izard et al. 1980 to the genus Kluyvera as Kluyvera intermedia comb. nov. and reclassification of Kluyvera cochleae as a later synonym of K. intermedia. International Journal of Systematic and Evolutionary Microbiology, 55(1), 437-442.
http://dx.doi.org/10.1099/ijs.0.63071-0
---------- CHICAGO ----------
Pavan, M.E., Franco, R.J., Rodriguez, J.M., Gadaleta, P., Abbott, S.L., Janda, J.M., et al. "Phylogenetic relationships of the genus Kluyvera: Transfer of Enterobacter intermedius Izard et al. 1980 to the genus Kluyvera as Kluyvera intermedia comb. nov. and reclassification of Kluyvera cochleae as a later synonym of K. intermedia" . International Journal of Systematic and Evolutionary Microbiology 55, no. 1 (2005) : 437-442.
http://dx.doi.org/10.1099/ijs.0.63071-0
---------- MLA ----------
Pavan, M.E., Franco, R.J., Rodriguez, J.M., Gadaleta, P., Abbott, S.L., Janda, J.M., et al. "Phylogenetic relationships of the genus Kluyvera: Transfer of Enterobacter intermedius Izard et al. 1980 to the genus Kluyvera as Kluyvera intermedia comb. nov. and reclassification of Kluyvera cochleae as a later synonym of K. intermedia" . International Journal of Systematic and Evolutionary Microbiology, vol. 55, no. 1, 2005, pp. 437-442.
http://dx.doi.org/10.1099/ijs.0.63071-0
---------- VANCOUVER ----------
Pavan, M.E., Franco, R.J., Rodriguez, J.M., Gadaleta, P., Abbott, S.L., Janda, J.M., et al. Phylogenetic relationships of the genus Kluyvera: Transfer of Enterobacter intermedius Izard et al. 1980 to the genus Kluyvera as Kluyvera intermedia comb. nov. and reclassification of Kluyvera cochleae as a later synonym of K. intermedia. Int. J. Syst. Evol. Microbiol. 2005;55(1):437-442.
http://dx.doi.org/10.1099/ijs.0.63071-0