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Abstract:

Bacterioplankton and bacterioperiphyton composition was analyzed using the CARD-FISH technique in three shallow lakes of the Pampean Plain (Argentina) with contrasting regimes: clear vegetated, turbid due to phytoplankton and turbid inorganic, due to inorganic particles. We postulated that these differences would influence the proportion of the main bacterial groups both in periphyton and in plankton. The turbid lake due to phytoplankton presented the highest total abundances in both communities. Alphaproteobacteria was the dominant group in the three lakes in both communities. Redundancy analysis (RDA) evidenced that the bacterioplankton structure was different among lakes and mainly influenced by dissolved inorganic nitrogen and conductivity. On the other hand, for the bacterioperiphyton, RDA showed that bacterial group abundances increased with higher periphytic chlorophyll-a values. In the clear lake the relative abundance of Betaproteobacteria and Cytophaga increased in the bacterioperiphyton towards the end of the colonization. Our study suggests that the lake regime (clear or turbid) influence the structure of bacterioplankton and bacterioperiphyton. © 2015, Escuela de Ciencias del Mar. All rights reserved.

Registro:

Documento: Artículo
Título:Periphytic and planktonic bacterial community structure in turbid and clear shallow lakes of the pampean plain (Argentina): A CARD-FISH approach
Autor:Sánchez, L.M.; Schiaffino, M.R.; Pizarro, H.; Izaguirre, I.
Filiación:Departamento de Ecología, Genética y Evolución, IEGEBA (UBA-CONICET), Universidad de Buenos Aires, Ciudad Universitaria, Intendente Güiraldes 2160, Buenos Aires, C1428EHA, Argentina
Palabras clave:Argentine; Bacterioperiphyton colonization; Bacterioplankton; CARD-FISH; Pampean plain; Shallow lakes
Año:2015
Volumen:43
Número:4
Página de inicio:662
Página de fin:674
DOI: http://dx.doi.org/10.3856/vol43-issue4-fulltext-5
Título revista:Latin American Journal of Aquatic Research
Título revista abreviado:Lat. Am. J. Aquatic Res.
ISSN:0718560X
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_0718560X_v43_n4_p662_Sanchez

Referencias:

  • Allende, L., Tell, G., Zagarese, H., Torremorell, A., Pérez, G., Bustingorry, J., Escaray, R., Izaguirre, I., Phytoplankton and primary production in clear-vegetated, inorganic-turbid, and algal-turbid shallow lakes from the pampa plain (Argentina) (2009) Hydro-Biologia, 624, pp. 45-60
  • Alonso-Sáez, L., Gasol, J., Seasonal variations in the contributions of different bacterial groups to the uptake of low-molecular-weight compounds in north-western Mediterranean coastal waters (2007) Appl. Environ. Microbiol., 73, pp. 3528-3535
  • Amann, R.I., Fuchs, B.M., Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques (2008) Nat. Rev. Microbiol., 6, pp. 339-348
  • Amann, R.I., Krumholz, L., Stahl, D.A., Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic and environmental studies in microbiology (1990) J. Bacteriol., 172, pp. 762-770
  • Amann, R.I., Ludwig, W., Schleifer, K.-H., Phylogenetic identification and in situ detection of individual microbial cells without cultivation (1995) Microbiol. Rev., 59, pp. 143-169
  • Standard methods for the examination of water and wastewaters (2005) Washington DC, 1217p
  • Araya, R., Tani, K., Takagi, T., Yamaguchi, N., Nasu, M., Bacterial activity and community composition in stream water and biofilm from an urban river determined by fluorescent in situ hybridization and DGGE analysis (2003) FEMS Microbiol. Ecol., 43, pp. 111-119
  • Bertoni, R., Callieri, C., Balseiro, E., Modenutti, B., Susceptibility of bacterioplankton to nutrient enrichment of oligotrophic and ultraoligotrophic lake waters (2008) J. Limnol., 67, pp. 120-127
  • Brinson, M.M., Niveles extremos de variación de patrones y procesos en humedales (2004) Documentos Del Curso-Taller: Bases ecológicas Para La clasificación E Inventario De Humedales En Argentina. Buenos Aires, pp. 19-24. , In: A.I. Malvárez & R. Bó (eds.)
  • Busscher, H.J., Van Der Mei, H.C., Initial microbial adhesion events: Mechanisms and implications (2000) Community Structure and Co-Operation in Biofilms. Society for General Microbiology, pp. 25-36. , D.G. Allinson, P. Gilbert, H.M. Lappin-Scott & M. Wilson (eds.). , University Press, Cambridge
  • Daims, H., Brühl, A., Amann, R., Schleifer, K.-H., Wagner, M., The domain-specific probe EUB 338 is insufficient for the detection of all Bacteria: Development and evaluation of a more comprehensive probe set (1999) Syst. Appl. Microbiol., 22, pp. 434-444
  • De Figueiredo, D.R., Pereira, M.J., Correia, A., Seasonal modulation of bacterioplankton community at a temperate eutrophic shallow lake (2010) World J. Microbiol. Biot., 26, pp. 1067-1077
  • Glöckner, F.O., Fuchs, B.M., Amann, R., Bacterioplankton compositions of lakes and oceans: A first comparison based on fluorescence in situ hybri-dization (1999) Appl. Environ. Microbiol., 65, pp. 3721-3726
  • Glöckner, F.O., Zaichickov, E., Belkova, N., Dessinova, L., Pernthaler, J., Amann, R., Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of Actinobacteria (2000) Appl. Environ. Microbiol., 66, pp. 5053-5065
  • Hempel, M., Blume, M., Blindow, I., Gross, E.M., Epiphytic bacterial community composition on two common submerged macrophytes in brackish water and freshwater (2008) BMC Microbiol., 8, p. 58
  • Izaguirre, I., Allende, L., Escaray, R., Bustingorry, J., Pérez, G., Tell, G., Comparison of morpho-functional phytoplankton classifications in human-impacted shallow lakes with different stable states (2012) Hydrobiologia, 698, pp. 203-216
  • Lemarchand, C., Jardillier, L., Carrias, J.-F., Richardot, M., Debroas, D., Sime-Ngando, T., Amblard, C., Community composition and activity of prokaryotes associated to detrital particles in two contrasting lake ecosystems (2006) FEMS Microbiol. Ecol., 57, pp. 442-451
  • Llames, M.E., Del Giorgio, P.A., Zagarese, H., Ferraro, M., Izaguirre, I., Alternative states drive the patterns in the bacterioplankton composition in shallow Pampean lakes (Argentina) (2013) Environ. Microbiol. Rep., 5, pp. 310-321
  • Logue, J.B., Bürgmann, H., Robinson, C.T., Progress in the ecological genetics and biodiversity of freshwater bacteria (2008) Bioscience, 58, pp. 103-113
  • Lorenzen, C.J., Determination of chlorophyll and pheopigments: Spectrophotometric equations (1967) Limnol. Oceanogr., 12, pp. 343-346
  • Lupini, G., Proia, L., Di Maio, M., Amalfitano, S., Fazi, S., CARD-FISH and confocal laser scanner microscopy to assess successional changes of the bacterial community in freshwater biofilms (2011) J. Microbiol. Meth., 86, pp. 248-251
  • Manz, W., Amann, R., Ludwig, W., Wagner, M., Schleifer, K.-H., Phylogenetic oligodeoxynuleotide probes for the major subclasses of proteobacteria: Problems and solutions (1992) Syst. Appl. Microbiol., 15, pp. 593-600
  • Manz, W., Amann, R., Ludwig, W., Vancanney, M., Schleifer, K.-H., Application of a suite of 16S rRNA -specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga- flavobacter-bacteroides in natural environment (1996) Microbiology, 142, pp. 1097-1106
  • Marker, A.F.H., Nusch, A., Rai, H., Riemann, B., The measurement of photosynthetic pigments in freshwater and standardization of methods: Conclusions and recommendations (1980) Arch. Hydrobiol. Beihefte Ergeb. Limnol., 14, pp. 91-106
  • Methé, B.A., Hiorns, W.D., Zehr, P.Z., Contrasts between marine and freshwater bacterial community composition: Analyzes of communities in Lake George and six other Adirondack lakes (1998) Limnol. Oceanogr., 43, pp. 368-374
  • Newton, R.J., Jones, S.E., Eiler, A., McMahon, K.D., Bertilsson, S., A guide to the natural history of freshwater lake bacteria (2011) Microbiol. Mol. Biol. Rev., 75, pp. 14-49
  • Pérez, G.L., Torremorell, A., Bustingorry, J., Escaray, R., Pérez, P., Diéguez, M., Zagarese, H., Optical characteristics of shallow lakes from the Pampa and Patagonia regions of Argentina (2010) Limnologica, 40, pp. 30-39
  • Pernthaler, A., Pernthaler, J., Amann, R., Sensitive multi-color fluorescence in situ hybridization for the identification of enviromental microorganisms (2004) Molec. Microb. Ecol. Manage., 2, pp. 771-726
  • Pernthaler, J., Glöckner, F.O., Schönhuber, W., Amann, R., Fluorescence in situ hybridization (FISH) with rRNA-targeted oligonucleotide probes (2001) Method. Microbiol., 30, pp. 207-226
  • Pernthaler, A., Preston, C.M., Pernthaler, J., Delong, E.F., Amann, R., Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea (2002) Appl. Environ. Microbiol., 68, pp. 661-667
  • Pohlon, E., Marxsen, J., Küsel, K., Pioneering bacterial and algal communities and potential extracellular enzyme activities of stream biofilms (2010) FEMS Microbiol. Ecol., 71, pp. 364-373
  • Posch, T., Mindl, B., Horňák, K., Jezbera, J., Salcher, M.M., Sattler, B., Sonntag, B., Šimek, K., Biomass reallocation within freshwater bacterio-plankton induced by manipulating phosphorus availability and grazing (2007) Aquat. Microb. Ecol., 49, pp. 223-232
  • Quirós, R., Renella, A.M., Boveri, M.B., Rosso, J., Sosnovsky, A., Factores que afectan la estructura y el funcionamiento de las lagunas pampeanas (2002) Ecol. Aust., 12, pp. 175-185
  • Quirós, R., Boveri, M.B., Petrachi, C.A., Renella, A.M., Rosso, J.J., Sosnovsky, A., Von Bernard, H.T., Los efectos de la agriculturización del humedal pampeano sobre la eutrofización de sus lagunas (2006) Eutrofização Na América Do Sul: Causas, conseqüências E Tecnologias De Gerenciamento E Controle, pp. 1-16. , In: J.G.T. Tundisi, C. Matsumura-Tundisi & G. Sidagis (eds.), São Carlo
  • Salcher, M.M., Pernthaler, J., Posch, T., Seasonal bloom dynamics and ecophysiology of the freshwater sister clade of SAR11 bacteria “that rule the waves” (LD12) (2011) ISME J., 5, pp. 1242-1252
  • Salcher, M.M., Same same but different: Ecological niche partitioning of planktonic freshwater proka-ryotes (2014) J. Limnol., 73, pp. 74-87
  • Sánchez, M.L., Pizarro, H., Tell, G., Izaguirre, I., Relative importance of periphyton and phytoplankton in turbid and clear vegetated shallow lakes from the Pampa Plain (Argentina): A comparative experimental study (2010) Hydrobiologia, 646, pp. 271-280
  • Sánchez, M.L., Pérez, G.L., Izaguirre, I., Pizarro, H., Influence of underwater light climate on periphyton and phytoplankton communities in shallow lakes from the Pampa plain (Argentina) with contrasting steady states (2013) J. Limnol., 72, pp. 62-78
  • Scheffer, M., (2009) Critical Transitions in Nature and Society, p. 384. , Princeton University, Oxford
  • Scheffer, M., (1998) Ecology of Shallow Lakes, p. 357. , Chapman & Hall, London
  • Scheffer, M., Hosper, S.H., Meijer, M.-L., Moss, B., Jeppesen, E., Alternative equilibria in shallow lakes (1993) TREE, 8, pp. 275-279
  • Sekar, R., Pernthaler, A., Pernthaler, J., Warnecke, F., Posch, T., Amann, R., An improved protocol for the quantification of freshwater actinobacteria by fluorescence in situ hybridization (2003) Appl. Environ. Microbiol., 69, pp. 2928-2935
  • Šimek, K., Hornák, K., Jezbera, J., Nedoma, J., Vrba, J., Straskrábová, V., Macek, M., Hahn, M.W., Maximum growth rates and possible life strategies of different bacterioplankton groups in relation to phosphorus availability in a freshwater reservoir (2006) Environ. Microbiol., 8, pp. 1613-1624
  • Silvoso, J., Izaguirre, I., Allende, L., Picoplankton structure in clear and turbid eutrophic shallow lakes: A seasonal study (2010) Limnologica, 41, pp. 181-190
  • Stoodley, P., Hall-Stoodley, L., Boyle, J.D., Jørgensen, F., Lappin-Scott, H.M., Environmental and genetic factors influencing biofilm structure (2000) Community Structure and Co-Operation in Biofilms. Society for General Microbiology, pp. 53-64. , D.G. Allinson, P. Gilbert, H.M. Lappin-Scott & M. Wilson (eds.). , University Press, Cambridge
  • Ter Braak, C.J.F., Canonical correspondence analysis: A new eigenvector technique for multivariate direct gradient analysis (1986) Ecology, 67, pp. 1167-1179
  • Ter Braak, C., Smilauer, P., CANOCO reference manual and CanoDraw for Windows user's guide: Software for canonical community ordination (version 4.5) (2002) Micro-Computer Power, 500p. , Ithaca, New York
  • Urdea, M.S., Warner, B.D., Running, J.A., Stempien, M., Clyne, J., Horn, T., A comparison of non-radioisotopic hybridization assay methods using fluorescent, chemiluminescent and enzyme labeled synthetic oligodeoxyribonucleotide probes (1988) Nucleic Acids Res., 16, pp. 4937-4956
  • Van Der Gucht, K., Vandekerckhove, T., Vloemans, N., Cousin, S., Muylaert, K., Sabbe, K., Declerk, M.G.S., Vyverman, W., Charac-terization of bacterial communities in four freshwater lakes differing in nutrient load and food web structure (2005) FEMS Microbiol. Ecol., 53, pp. 205-220
  • Velji, M.I., Albright, L.J., Improved sample preparation for enumeration of aggregated aquatic substrate bacteria (1993) Handbook of Methods in Aquatic Microbial Ecology, pp. 139-142. , In: P.F. Kemp, B.F. Sherr, E. Sherr & J.J. Cole (eds.), Lewis Publishers, Florida
  • Villar, C., De Cabo, L., Vaithiyanathan, P., Bonetto, C., River-floodplain interactions: Nutrient concen-trations in the Lower Paraná River (1998) Arch. Hydro-Biol., 142, pp. 433-450
  • Warnecke, F., Sommaruga, R., Sekar, R., Hofer, J.S., Pernthaler, J., Abundances, identity, and growth state of actinobacteria in mountain lakes of different UV transparency (2005) Appl. Environ. Microbiol., 71, pp. 5551-5559

Citas:

---------- APA ----------
Sánchez, L.M., Schiaffino, M.R., Pizarro, H. & Izaguirre, I. (2015) . Periphytic and planktonic bacterial community structure in turbid and clear shallow lakes of the pampean plain (Argentina): A CARD-FISH approach . Latin American Journal of Aquatic Research, 43(4), 662-674.
http://dx.doi.org/10.3856/vol43-issue4-fulltext-5
---------- CHICAGO ----------
Sánchez, L.M., Schiaffino, M.R., Pizarro, H., Izaguirre, I. "Periphytic and planktonic bacterial community structure in turbid and clear shallow lakes of the pampean plain (Argentina): A CARD-FISH approach " . Latin American Journal of Aquatic Research 43, no. 4 (2015) : 662-674.
http://dx.doi.org/10.3856/vol43-issue4-fulltext-5
---------- MLA ----------
Sánchez, L.M., Schiaffino, M.R., Pizarro, H., Izaguirre, I. "Periphytic and planktonic bacterial community structure in turbid and clear shallow lakes of the pampean plain (Argentina): A CARD-FISH approach " . Latin American Journal of Aquatic Research, vol. 43, no. 4, 2015, pp. 662-674.
http://dx.doi.org/10.3856/vol43-issue4-fulltext-5
---------- VANCOUVER ----------
Sánchez, L.M., Schiaffino, M.R., Pizarro, H., Izaguirre, I. Periphytic and planktonic bacterial community structure in turbid and clear shallow lakes of the pampean plain (Argentina): A CARD-FISH approach . Lat. Am. J. Aquatic Res. 2015;43(4):662-674.
http://dx.doi.org/10.3856/vol43-issue4-fulltext-5