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Abstract:

The nucleotide sequences of genomic segments S7 and S9 of Mal de Río Cuarto virus (MRCV, Fijivirus group II) have been determined, thus completing the entire genome sequence of the virus. These segments showed a non-overlapping bicistronic structure, as in other members of the genus. MRCV S7 ORF-1 had a length of 1086 bp and encoded a 41.5 kDa putative polypeptide, whereas MRCV S7 ORF-2 had a length of 930 bp and encoded a 36.8 kDa putative polypeptide. Proteins of 39 and 20.5 kDa were predicted for the 1014 bp long MRCV S9 ORF-1 and the 537 bp long MRCV S9 ORF-2, respectively. The terminal 5′ and 3′ sequences of both segments were 5′AAGUUUUU3′ and 5′CAGCUnnnGUC3′, respectively. Specific imperfect inverted repeats of each segment were identified. Comparison of the predicted proteins with those of related virus genome segments counterparts in maize rough dwarf virus (MRDV) and rice black streaked dwarf virus (RBSDV), showed 64.5-44.3% identities. These values are lower than those resulting from comparisons between MRDV and RBSDV. The topology of the trees obtained using the complete nucleotide and amino acid sequences of MRCV S7 and MRCV S9 was consistent with the analysis of the other MRCV segments previously published. © 2006 Springer-Verlag.

Registro:

Documento: Artículo
Título:Sequencing of the bicistronic genome segments S7 and S9 of Mal de Río Cuarto virus (Fijivirus, Reoviridae) completes the genome of this virus
Autor:Guzmán, F.A.; Distéfano, A.J.; Arneodo, J.D.; Hopp, H.E.; Lenardon, S.L.; Del Vas, M.; Conci, L.R.
Filiación:Instituto de Fitopatología y Fisiología Vegetal, CICVyA, INTA, Córdoba, Argentina
Instituto de Biotecnología, CICVyA, INTA, Castelar, Buenos Aires, Argentina
Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Argentina
Unidad Integrada CNIA, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Argentina
Instituto de Fitopatología y Fisiología Vegetal, INTA-IFFIVE, Camino 60 cuadras Km. 51/2, (X5020ICA), Córdoba, Argentina
Palabras clave:3' untranslated region; 5' untranslated region; article; biology; classification; genetics; molecular cloning; nucleotide sequence; phylogeny; Reovirus; sequence homology; virus genome; 3' Untranslated Regions; 5' Untranslated Regions; Base Sequence; Cloning, Molecular; Computational Biology; Genome, Viral; Phylogeny; Reoviridae; Sequence Homology, Nucleic Acid; Fijivirus; Maize rough dwarf virus; Mal de Rio Cuarto virus; Orthoreovirus; Reoviridae; Rice black streaked dwarf virus; Zea mays
Año:2007
Volumen:152
Número:3
Página de inicio:565
Página de fin:573
DOI: http://dx.doi.org/10.1007/s00705-006-0864-2
Título revista:Archives of Virology
Título revista abreviado:Arch. Virol.
ISSN:03048608
CODEN:ARVID
CAS:3' Untranslated Regions; 5' Untranslated Regions
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_03048608_v152_n3_p565_Guzman

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Citas:

---------- APA ----------
Guzmán, F.A., Distéfano, A.J., Arneodo, J.D., Hopp, H.E., Lenardon, S.L., Del Vas, M. & Conci, L.R. (2007) . Sequencing of the bicistronic genome segments S7 and S9 of Mal de Río Cuarto virus (Fijivirus, Reoviridae) completes the genome of this virus. Archives of Virology, 152(3), 565-573.
http://dx.doi.org/10.1007/s00705-006-0864-2
---------- CHICAGO ----------
Guzmán, F.A., Distéfano, A.J., Arneodo, J.D., Hopp, H.E., Lenardon, S.L., Del Vas, M., et al. "Sequencing of the bicistronic genome segments S7 and S9 of Mal de Río Cuarto virus (Fijivirus, Reoviridae) completes the genome of this virus" . Archives of Virology 152, no. 3 (2007) : 565-573.
http://dx.doi.org/10.1007/s00705-006-0864-2
---------- MLA ----------
Guzmán, F.A., Distéfano, A.J., Arneodo, J.D., Hopp, H.E., Lenardon, S.L., Del Vas, M., et al. "Sequencing of the bicistronic genome segments S7 and S9 of Mal de Río Cuarto virus (Fijivirus, Reoviridae) completes the genome of this virus" . Archives of Virology, vol. 152, no. 3, 2007, pp. 565-573.
http://dx.doi.org/10.1007/s00705-006-0864-2
---------- VANCOUVER ----------
Guzmán, F.A., Distéfano, A.J., Arneodo, J.D., Hopp, H.E., Lenardon, S.L., Del Vas, M., et al. Sequencing of the bicistronic genome segments S7 and S9 of Mal de Río Cuarto virus (Fijivirus, Reoviridae) completes the genome of this virus. Arch. Virol. 2007;152(3):565-573.
http://dx.doi.org/10.1007/s00705-006-0864-2