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Abstract:

Heterochromatin distribution and chromosomal rearrangements have been proposed as the main sources of karyotype differences among species of Neotropical primates. This variability suggests that there could be differences at other smaller-scale levels of DNA organization as well. In particular, quantitative differences between genomes result from gains and losses of individual DNA segments, and may result in varying genome sizes (C-values) among species. In this work, we studied the genomes of 23 individuals from four species in the genus Ateles (Primates: Platyrrhini): A. chamek, A. paniscus, A. belzebuth, and A. geoffroyi. We analyzed genome size and its relationship with the presence of chromosomal rearrangements and patterns of heterochromatin distribution. The C-value presented in this work for Ateles chamek is the first estimate for this species (3.09 ± 0.23 pg), whereas our estimates for A. belzebuth (2.88 ± 0.06 pg) and A. geoffroyi (3.19 ± 0.24 pg) differed from those previously published. Fluorescent in situ hybridization (FISH) and interspecies comparativegenomic hybridization (iCGH) analyses revealed that differences in genome size among species relate to localized blocks in both heterochromatic and euchromatic regions, the latter of which appear to be genetically unstable. There were also quantitative differences in Y chromosome content. It remains to be seen whether the chromosomal characteristics of Ateles here discussed are common to platyrrhine monkeys, but it is clear that these monkeys exhibit some intriguing genomic features worthy of additional exploration. © 2016 The Linnean Society of London

Registro:

Documento: Artículo
Título:Qualitative and quantitative analysis of the genomes and chromosomes of spider monkeys (Primates: Atelidae)
Autor:Fantini, L.; Jeffery, N.W.; Pierossi, P.; Gregory, T.R.; Nieves, M.
Filiación:Grupo de Investigación en Biología Evolutiva, Departamento de Ecología, Genética y Evolución, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, IEGEBA (CONICET-UBA), Ciudad Universitaria, Buenos Aires, Argentina
Department of Integrative Biology, University of Guelph, Guelph, ON N1G 2W1, Canada
Consejo Nacional de Investigaciones Científicas y Técnicas CONICET, Buenos Aires, Argentina
Palabras clave:C-value; genome; heterochromatin; interspecies comparative genomic hybridization; primates; repetitive DNA; chromosome; DNA; genetic analysis; genome; genomics; karyotype; population genetics; primate; qualitative analysis; quantitative analysis; Ateles; Ateles belzebuth chamek; Ateles sp.; Paniscus; Platyrrhini; Primates
Año:2016
Volumen:118
Número:4
Página de inicio:752
Página de fin:762
DOI: http://dx.doi.org/10.1111/bij.12775
Título revista:Biological Journal of the Linnean Society
Título revista abreviado:Biol. J. Linn. Soc.
ISSN:00244066
CODEN:BJLSB
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_00244066_v118_n4_p752_Fantini

Referencias:

  • Avramova, Z.V., Heterochromatin in animals and plants. Similarities and differences (2002) Plant Physiology, 129, pp. 40-49
  • Bachtrog, D., Y-chromosome evolution: emerging insights into processes of Y-chromosome degeneration (2013) Genetics, 14, pp. 113-124. , Nature reviews., –
  • Belyayev, A., Bursts of transposable elements as an evolutionary driving force (2014) Journal of Evolutionary Biology, 27, pp. 2573-2584
  • de Boer, L.E.M., de Bruijn, M., Chromosomal distinction between the red-faced and black-faced black spider monkeys (Ateles paniscus paniscus and A. p. chamek) (1990) Zoo Biology, 9, pp. 307-316
  • Böhne, A., Brunet, F., Galiana-Arnoux, D., Schultheis, C., Volff, J.N., Transposable elements as drivers of genomic and biological diversity in vertebrates (2008) Chromosome Research, 16, pp. 203-215
  • Boulesteix, M., Weiss, M., Biémont, C., Differences in genome size between closely related species: the drosophila melanogaster species subgroup (2006) Molecular Biology and Evolution, 23, pp. 162-167
  • Capanna, E., Mus musculus: un modelo de especiación cromosómica (1995) Marmosiana, 1, pp. 7-22
  • Capanna, E., Civitelli, M.V., Cristaldi, M., Chromosomal rearrangement, reproductive isolation and speciation in mammals. The case of Mus musculus (1977) Italian Journal of Zoology, 44, pp. 213-246
  • Collins, A.C., Dubach, J.M., Nuclear DNA Variation in Spider Monkeys (Ateles) (2001) Molecular Phylogenetics and Evolution, 19, pp. 67-75
  • De Oliveira, E.H.C., Neusser, M., Pieczarka, J.C., Nagamachi, C., Sbalqueiro, I.J., Müller, S., Phylogenetic inferences of Atelinae (Platyrrhini) based on multi-directional chromosome painting in Brachyteles arachnoides, Ateles paniscus paniscus and Ateles b. marginatus (2005) Cytogenetic and Genome Research, 108, pp. 183-190
  • Elliott, T.A., Gregory, T.R., Do larger genomes contain more diverse transposable elements? (2015) BMC Evolutionary Biology, 15, p. 69
  • Elliott, T.A., Gregory, T.R., What's in a genome? The C-value enigma and the evolution of eukaryotic genome content (2015) Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 370, p. 20140331
  • Fantini, L., Mudry, M.D., Nieves, M., Genome size of two Cebus species (Primates: Platyrrhini) with a fertile hybrid and their quantitative genomic differences (2011) Cytogenetic and Genome Research, 135, pp. 33-41
  • García, F., Ruiz-Herrera, A., Egozcue, J., Ponsà, M., Garcia, M., Chromosomal homologies between Cebus and Ateles (Primates) based on ZOO-FISH and G-banding comparisons (2002) American Journal of Primatology, 57, pp. 177-188
  • Gifalli-Iughetti, C., Koiffmann, C.P., The Y chromosome of the Atelidae family (Platyrrhini): study by chromosome microdissection (2009) Cytogenetic and Genome Research, 125, pp. 46-53
  • Gregory, T.R., The C-value Enigma in Plants and Animals: a review of parallels and an appeal for partnership (2005) Annals of Botany, 95, pp. 33-146
  • Hardie, D.C., Gregory, T.R., Hebert, P.D.N., From pixels to picograms: a beginners' guide to genome quantification by Feulgen image analysis densitometry (2002) The Journal of Histochemistry & Cytochemistry, 50, pp. 735-749
  • Herzog, S., Herzog, A., Höhn, H., Matern, B., Hecht, W., Chromosome polymorphism in Ateles geoffroyi (Cebidae; Primates; Mammalia) (1992) Theoretical and Applied Genetics, 84, pp. 986-989
  • Kidwell, M.G., Lisch, D.R., Transposable elements as sources of genomic variation (2002) Mobile DNA II, pp. 59-90. , In, Craig NL, Craigie R, Gellert M, Lambowitz AM, eds., Washington, DC, American Society for Microbiology, –
  • Kraaijeveld, K., Genome size and species diversification (2010) Evolutionary Biology, 37, pp. 227-233
  • Kunkel, L., Heltne, P., Borgaonkar, D., Chromosomal variation and zoogeography in Ateles (1980) International Journal of Primatology, 1, pp. 223-232
  • Manfredi Romanini, M.G., Nuclear DNA content and area of primate lymphocytes as a cytotaxonomical tool (1972) Journal of Human Evolution, 1, pp. 23-40
  • Manfredi Romanini, M.G., The nuclear content of desoxyribonucleic acid and some problems of Mammalian phylogenesis (1985) Mammalia, 49, pp. 369-385
  • Medeiros, M.A., Barros, R.M., Pieczarka, J.C., Nagamachi, C.Y., Ponsa, M., Garcia, M., Garcia, F., Egozcue, J., Radiation and speciation of spider monkeys, genus Ateles, from the cytogenetic viewpoint (1997) American Journal of Primatology, 42, pp. 167-178
  • Morand, S., Ricklefs, R., Genome size is not related to life-history traits in primates (2005) Genome, 48, pp. 273-278
  • Morescalchi, M., Schempp, W., Consigliere, S., Bigoni, F., Wienberg, J., Stanyon, R., Mapping chromosomal homology between humans and the black-handed spider monkey by fluorescence in situ hybridization (1997) Chromosome Research, 5, pp. 527-536
  • Mudry, M.D., Rahn, M.I., Gorostiaga, M., Hick, A., Merani, M.S., Solari, A.J., Revised karyotype of Alouatta caraya (Primates: Platyrrhini) based on synaptonemal complex and banding analyses (1998) Hereditas, 128, pp. 9-16
  • Neusser, M., Münch, M., Anzenberger, G., Müller, S., Investigation of marmoset hybrids (Cebuella pygmaea × Callithrix jacchus) and related Callitrichinae (Platyrrhini) by cross-species chromosome painting and comparative genomic hybridization (2005) Cytogenetic and Genome Research, 108, pp. 191-196
  • Nieves, M., Ascunce, M.S., Rahn, M.I., Mudry, M.D., Phylogenetic relationships among some Ateles species: the use of chromosomic and molecular characters (2005) Primates, 46, pp. 155-164
  • Nieves, M., Mühlmann, M., Mudry, M.D., Cebus paraguayanus and Cebus nigritus (Primates, Platyrrhini): a comparative genomic hybridization analysis (2010) Cytogenetic and Genome Research, 128, pp. 214-220
  • Pellicciari, C., Formenti, D., Redi, C.A., Manfredi, Romanini, M.G., DNA content variability in primates (1982) Journal of Human Evolution, 11, pp. 131-141
  • Pieczarka, J.C., Nagamachi, C., Barros, R.M., The karyotype of Ateles paniscus paniscus (Cebidae, Primates): 2n = 32 (1989) Revista Brasilera de Genética, 12, pp. 543-551
  • Redi, C.A., Capanna, E., Genome size evolution: sizing mammalian genomes (2012) Cytogenetic and Genome Research, 137, pp. 97-112
  • Redi, C., Garagna, S., Zacharias, H., Zuccotti, M., Capanna, E., The other chromatin (2001) Chromosoma, 110, pp. 136-147
  • Reig, O.A., Significado de nos métodos citogenéticos para la distinción y la interpretación de las especies, con especial referencía a los mamífero (1984) Revista del Museo Argentino de Ciencias Naturales, 13, pp. 19-44
  • Ronchetti, E., Crovella, S., Rumpler, Y., Pellicciari, C., Manfredi Romanini, M.G., Genome size and qualitative and quantitative characteristics of C-heterochromatic DNA in Eulemur species and in a viable hybrid. Cytogenetics and Cell (1993) Genetics, 63, pp. 1-5
  • Rylands, A.B., Mittermeier, R.A., The diversity of the new world primates (Platyrrhini): an annotated taxonomy (2009) South American primates: comparatives perspectives in the study of behavior ecology, and conservation, pp. 23-54. , In, Philadelphia, Springer, –
  • Rylands, A.B., Mittermeier, R.A., Silva, J.S., Neotropical primates: taxonomy and recently described species and subspecies (2012) International Zoo Yearbook, 46, pp. 11-24
  • Seuánez, H.N., Alves, G., O'Brien, S.J., Gene mapping in the spider monkey (Ateles paniscus chamek) (1994) Journal of Heredity, 85, pp. 466-473
  • Seuánez, H.N., Bonvicino, C.R., Moreira, M.A.M., The primates of the Neotropics: genomes and chromosomes (2005) Cytogenetic and Genome Research, 108, pp. 38-46
  • Solari, A.J., (1994) Sex chromosomes and sex determination in vertebrates, , Boca Raton, CRC Press
  • Steinberg, E.R., Nieves, M., Fantini, L., Mudry, M.D., Primates karyological diagnosis and management programs applications (2014) Journal of Medical Primatology, 43, pp. 455-467
  • Vinogradov, A.E., Genome size and chromatin condensation in vertebrates (2005) Chromosoma, 113, pp. 362-369
  • Yu, H.T., Ma, G.C., Lee, D.J., Chin, S.C., Chen, T.L., Tsao, H.S., Lin, W.H., Chen, M., Use of a cytogenetic whole-genome comparison to resolve phylogenetic relationships among three species: implications for mammalian systematics and conservation biology (2012) Theriogenology, 77, pp. 1615-1623

Citas:

---------- APA ----------
Fantini, L., Jeffery, N.W., Pierossi, P., Gregory, T.R. & Nieves, M. (2016) . Qualitative and quantitative analysis of the genomes and chromosomes of spider monkeys (Primates: Atelidae). Biological Journal of the Linnean Society, 118(4), 752-762.
http://dx.doi.org/10.1111/bij.12775
---------- CHICAGO ----------
Fantini, L., Jeffery, N.W., Pierossi, P., Gregory, T.R., Nieves, M. "Qualitative and quantitative analysis of the genomes and chromosomes of spider monkeys (Primates: Atelidae)" . Biological Journal of the Linnean Society 118, no. 4 (2016) : 752-762.
http://dx.doi.org/10.1111/bij.12775
---------- MLA ----------
Fantini, L., Jeffery, N.W., Pierossi, P., Gregory, T.R., Nieves, M. "Qualitative and quantitative analysis of the genomes and chromosomes of spider monkeys (Primates: Atelidae)" . Biological Journal of the Linnean Society, vol. 118, no. 4, 2016, pp. 752-762.
http://dx.doi.org/10.1111/bij.12775
---------- VANCOUVER ----------
Fantini, L., Jeffery, N.W., Pierossi, P., Gregory, T.R., Nieves, M. Qualitative and quantitative analysis of the genomes and chromosomes of spider monkeys (Primates: Atelidae). Biol. J. Linn. Soc. 2016;118(4):752-762.
http://dx.doi.org/10.1111/bij.12775