Artículo

El editor solo permite decargar el artículo en su versión post-print desde el repositorio. Por favor, si usted posee dicha versión, enviela a
Consulte el artículo en la página del editor
Consulte la política de Acceso Abierto del editor

Abstract:

In South America, native maize germplasm has been extensively studied particularly for the Andean region. However, relatively few genetic diversity studies include materials from the eastern region of the continent. Herein we present a genetic diversity characterization of four Popcorn maize landraces, maintained in indigenous settlements, from Northeastern Argentina (NEA). In addition, one Popcorn landrace from Northwestern Argentina (NWA) was incorporated for comparison. We characterized these landraces using ten microsatellite markers. For the whole data set, a total of 65 alleles were found, with an average of 7.22 alleles per locus. The average gene diversity was 0.370. Global fit to Hardy-Weinberg proportions was observed in all landraces. Global estimates of FST revealed a significant differentiation among the populations. Individual Neighbor-joining clustering and Bayesian analyses allowed the recognition of most populations studied. Two main groups were distinguished by the Neighbor-joining clustering of populations. This grouping pattern would be consistent with a hypothesis of successive introductions of Popcorn in South America. The results presented will be useful to design strategies that maximize the utility of maize genetic resources. © 2008 Springer Science+Business Media B.V.

Registro:

Documento: Artículo
Título:Genetic diversity in maize landraces from indigenous settlements of Northeastern Argentina
Autor:Bracco, M.; Lia, V.V.; Gottlieb, A.M.; Cámara Hernández, J.; Poggio, L.
Filiación:Laboratorio de Citogenética Y Evolución (LaCyE), Departamento de Ecología, Genética Y Evolución, Ciudad Universitaria, Intendente Güiraldes y Costanera Norte s/n, C1428EHA Autonomous City of Buenos Aires, Argentina
Consejo Nacional de Investigaciones Científicas Y Técnicas, Avenida Rivadavia 1917, Autonomous City of Buenos Aires C1033AAJ, Argentina
Laboratorio de Recursos Genéticos Vegetales 'N. I. Vavilov', Facultad de Agronomía, Universidad de Buenos Aires, Avenida San Martín 4453, C1417DSE Autonomous City of Buenos Aires, Argentina
Palabras clave:Genetic diversity; Maize landraces; Microsatellites; Northeastern Argentina; Popcorn; microsatellite DNA; plant DNA; allele; Argentina; article; classification; cluster analysis; gene frequency; genetic variability; genetics; genotype; maize; molecular evolution; phylogeny; Alleles; Argentina; Cluster Analysis; DNA, Plant; Evolution, Molecular; Gene Frequency; Genetic Variation; Genotype; Microsatellite Repeats; Phylogeny; Zea mays; Zea mays
Año:2009
Volumen:135
Número:1
Página de inicio:39
Página de fin:49
DOI: http://dx.doi.org/10.1007/s10709-008-9252-z
Título revista:Genetica
Título revista abreviado:Genetica
ISSN:00166707
CODEN:GENEA
CAS:DNA, Plant
Registro:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_00166707_v135_n1_p39_Bracco

Referencias:

  • Barnaud, A., Deu, M., Garine, E., McKey, D., Joly, H.I., Local genetic diversity of sorghum in a village in Northern Cameroon: Structure and dynamics of landraces (2007) Theor Appl Genet, 114, pp. 237-248
  • Bassam, B.J., Caetano-Anollés, G., Greshoff, P.M., Fast and sensitive silver staining of DNA in polyacrylamide gels (1991) Anal Biochem, 196, pp. 81-84
  • Camus-Kulandaivelu, L., Veyrieras, J.B., Gouesnard, B., Charcosset, A., Manicacci, D., Evaluating the reliability of structure outputs in case of relatedness between individuals (2007) Crop Sci, 47, pp. 887-892
  • Carvalho, V.P., Ruas, C.F., Ferreira, J.M., Moreira, R.M.P., Rusas, P.M., Genetic diversity among maize (Zea mays L.) landraces assessed by RAPD markers (2004) Genet Mol Biol, 27, pp. 228-236. , 2
  • Dellaporta, I.K., Wood, J., Hicks, J.B., A plant DNA minipreparation: Version II (1983) Plant Mol Biol Rep, 1, pp. 19-21
  • Doebley, J., Molecular evidence and the evolution of maize (1990) Econ Bot, 44, pp. 7-25
  • El Mousadik, A., Petit, R., High level of genetic differentiation for allelic richness among populations of the argan tree (Argania spinosa (L.) Skeels) endemic to Morocco (1996) Theor Appl Genet, 92, pp. 832-839
  • Felsenstein, J., (1991) Phylip (Phylogeny Inference Package), , University of Washington, Washington
  • Gaggiotti, O.E., Lange, O., Rassmann, K., Gliddon, C., A comparison of two indirect methods for estimating average levels of gene flow using microsatellite data (1999) Mol Ecol, 8, pp. 1513-1520
  • Goodman, M.M., McK. Bird, R., The races of maize iv: Tentative grouping of 219 Latin American races (1977) Econ Bot, 31, pp. 204-221
  • Goodman, M.M., Stuber, C.W., Races of maize. VI. Isozyme variation among races of maize in Bolivia (1983) Maydica, 28, pp. 169-187
  • Goudet, J., (2001) FSTAT, a Program to Estimate and Test Gene Diversities and Fixation Indices (Version 2.9.3), , http://www.unil.ch/izea/softwares/fstat.html, Available from
  • Goudet, FSTAT version 1.2: A computer program to calculate F-statistics (1995) J Hered, 86, pp. 485-486. , Updated from
  • Hardy, O.J., Charbonnel, N., Freville, H., Heuertz, M., Microsatellite allele sizes: A simple test to assess their significance on genetic differentiation (2003) Genetics, 163, pp. 1467-1482
  • Kimura, M., Crow, J.F., The number of alleles that can be maintained in a finite population (1964) Genetics, 49, pp. 725-738
  • Kimura, M., Ohta, T., Stepwise mutation model and distribution of allelic frequencies in finite populations (1978) Proc Natl Acad Sci, 75, pp. 2868-2872
  • Latournerie Moreno, L., Tuxill, J., Yupit Moo, E., Arias Reye, L., Alejo, J.C., Jarvis, D.I., Traditional maize storage methods of Mayan farmers in Yucatan, Mexico: Implications for seed selection and crop diversity (2006) Biodivers Conserv, 15, pp. 1771-1795
  • Lia, V.V., (2004) Diversidad Genética Y Estructura Poblacional en Razas Nativas de Maíz (Zea mays ssp. mays) del Noroeste Argentino: Presente Y Pasado del Germoplasma Autóctono, 193p. , Doctoral Thesis, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires
  • Lia, V.V., Confalonieri, V.A., Ratto, N., Cámara Hernández, J.A., Miante Alzogaray, A.M., Poggio, L., Brown, T.A., Microsatellite typing of ancient maize: Insights into the history of agriculture in southern South America (2007) Proc R Soc B, 274, pp. 545-554
  • Lia, V.V., Bracco, M., Gottlieb, A.M., Poggio, L., Confalonieri, V.A., Complex mutational patterns and size homoplasy at maize microsatellite loci (2007) Theor Appl Genet, 115, pp. 981-991
  • Liu, K., Goodman, M., Muse, S., Smith, J.S., Buckler, E., Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites (2003) Genetics, 165, pp. 2117-2128
  • Matsuoka, Y., Vigouroux, Y., Goodman, M.M., Sánchez, G.J., Buckler, E.S., Doebley, J.F., A single domestication for maize shown by multilocus microsatellite genotyping (2002) Proc Natl Acad Sci, 99, pp. 6080-6084
  • Matsuoka, Y., Mitchell, S.E., Kresovich, S., Goodman, M.M., Doebley, J.F., Microsatellites in Zea - Variability, patterns of mutations, and use for evolutionary studies (2002) Theor Appl Genet, 104, pp. 436-450
  • McClintock, B., Kato, T.A., Blumenschein, A., (1981) Chromosome Constitution of the Races of Maize. Its Significance in the Interpretation of Relationships between Races and Varieties in the Americas, pp. 125-173. , Colegio de Postgraduados Chapingo, México
  • Minch, E., Ruiz Linares, A., Goldstein, D., Feldman, M., Cavalli-Sforza, L.L., (1995) Microsat (Version 1.5b): A Computer Program for Calculating Various Statistics on Microsatellite Allele Data, , http://www.btkastanfordedu/microsat.html, Available at
  • Nei, M., Genetic distance between populations (1972) Am Nat, 106, pp. 283-292
  • Nei, M., (1987) Molecular Evolutionary Genetics, , Columbia University Press New York
  • Nybom, H., Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants (2004) Mol Ecol, 13, pp. 1143-1155
  • Oliveira Freitas, F., Bendel, G., Allaby, R.G., Brown, T., DNA from primitive maize landraces and archaeological remains: Implications for the domestication of maize and its expansion into South America (2003) J Archaeol Sci, 30, pp. 901-908
  • Page, R.D.M., TREEVIEW: An application to display phylogenetic trees on personal computers (1996) Comput Appl Biosci, 12, pp. 357-358
  • Peakall, R., Smouse, P.E., GENALEX 6: Genetic analysis in Excel. Population genetic software for teaching and research (2006) Mol Ecol Notes, 6, pp. 288-295
  • Perales, R.H., Brush, S.B., Qualset, C.O., Landraces of maize in Central Mexico: An altitudinal transect (2003) Econ Bot, 57, pp. 7-20
  • Piperno, D.R., Flannery, K.V., The earliest archaeological maize (Zea mays L.) from highland Mexico: New accelerator mass spectrometry dates and their implications (2001) Proc Natl Acad Sci, 98, pp. 2101-2103
  • Piperno, D.R., Pearsall, D.M., (1998) The Origins of Agriculture in the Lowland Neotropics, , Academic Press San Diego
  • Pressoir, G., Berthaud, J., Population structure and strong divergent selection shape phenotypic diversification in maize landraces (2004) Heredity, 92, pp. 95-101
  • Pressoir, G., Berthaud, J., Patterns of population structure in maize landraces from the Central Valleys of Oaxaca in Mexico (2004) Heredity, 92, pp. 88-94
  • Pritchard, J.K., Stephens, M., Donnelly, P., Inference of population structure using multilocus genotype data (2000) Genetics, 155, pp. 945-959
  • Raymond, M., Rousset, F., Genepop (version 1.2): Population genetics software for exact tests and ecumenicism (1995) J Hered, 86, pp. 248-249
  • Reif, J.C., Warburton, M.L., Xia, X.C., Hoisington, D.A., Crossa, J., Taba, S., Muminovic, J., Melchinger, A.E., Grouping of accessions of Mexican races of maize revisited with SSR markers (2006) Theor Appl Genet, 113, pp. 177-185
  • Rice, W., Analysing tables of statistical tests (1989) Evolution, 43, pp. 223-225
  • Saitou, N., Nei, M., The neighbor-joining method: A new method for reconstructing phylogenetic trees (1987) Mol Biol Evol, 4, pp. 406-425
  • Sánchez, G.J., Stuber, J.C.W., Goodman, M.M., Isozymatic diversity in the races of maize of the Americas (2000) Maydica, 45, pp. 185-203
  • Santacruz-Varela, A., Widrlechner, M.P., Ziegler, K.E., Salvador, R.J., Millard, M.J., Bretting, P.K., Phylogenetic relationships among North American popcorns and their evolutionary links to Mexican and South American popcorns (2004) Crop Sci, 44, pp. 1456-1467
  • Senior, M.L., Murphy, J.P., Goodman, M.M., Stuber, C.W., Utility of SSRs for determining genetic similarities and relationships in maize using an agarose gel system (1998) Crop Sci, 38, pp. 1088-1098
  • Slatkin, M., A measure of population subdivision based on microsatellite allele frequencies (1995) Genetics, 139, pp. 457-462
  • Vigouroux, Y., Jaqueth, J.S., Matsuoka, Y., Smith, O.S., Beavis, W.D., Smith, J.S.C., Doebley, J., Rate and pattern of mutation at microsatellite loci in maize (2002) Mol Biol Evol, 19, pp. 1251-1260
  • Weir, B., Cockerham, C.C., Estimating F-statistics for the analysis of population structure (1984) Evolution, 38, pp. 1358-1370
  • Wright, S., (1978) Variability Within and among Natural Populations in Evolution and the Genetics of Populations, , University of Chicago Press Chicago
  • Xia, X.C., Reif, J.C., Hoisington, D.A., Melchinger, A.E., Frisch, M., Warburton, M.L., Genetic diversity among CIMMYT maize inbred lines investigated with SSR markers: I. Lowland tropical maize (2004) Crop Sci, 44, pp. 2230-2237
  • Xia, X.C., Reif, J.C., Melchinger, A.E., Frisch, M., Hoisington, D.A., Beck, D., Pixley, K., Warburton, M.L., Genetic diversity among CIMMYT maize inbred lines investigated with SSR markers: II. Subtropical, tropical midaltitude, and highland maize inbred lines and their relationships with elite U.S. and European maize (2005) Crop Sci, 45, pp. 2573-2582

Citas:

---------- APA ----------
Bracco, M., Lia, V.V., Gottlieb, A.M., Cámara Hernández, J. & Poggio, L. (2009) . Genetic diversity in maize landraces from indigenous settlements of Northeastern Argentina. Genetica, 135(1), 39-49.
http://dx.doi.org/10.1007/s10709-008-9252-z
---------- CHICAGO ----------
Bracco, M., Lia, V.V., Gottlieb, A.M., Cámara Hernández, J., Poggio, L. "Genetic diversity in maize landraces from indigenous settlements of Northeastern Argentina" . Genetica 135, no. 1 (2009) : 39-49.
http://dx.doi.org/10.1007/s10709-008-9252-z
---------- MLA ----------
Bracco, M., Lia, V.V., Gottlieb, A.M., Cámara Hernández, J., Poggio, L. "Genetic diversity in maize landraces from indigenous settlements of Northeastern Argentina" . Genetica, vol. 135, no. 1, 2009, pp. 39-49.
http://dx.doi.org/10.1007/s10709-008-9252-z
---------- VANCOUVER ----------
Bracco, M., Lia, V.V., Gottlieb, A.M., Cámara Hernández, J., Poggio, L. Genetic diversity in maize landraces from indigenous settlements of Northeastern Argentina. Genetica. 2009;135(1):39-49.
http://dx.doi.org/10.1007/s10709-008-9252-z