Abstract:
Previous studies have demonstrated that double phosphorylation of a protein can lead to bistability if some conditions are fulfilled. It was also shown that the signaling behavior of a covalent modification cycle can be quantitatively and, more importantly, qualitatively modified when this cycle is coupled to a signaling pathway as opposed to being isolated. This property was named retroactivity. These two results are studied together in this paper showing the existence of interesting phenomena-oscillations and bistability-in signaling cascades possessing at least one stage with a double-phosphorylation cycle as in MAPK cascades. © 2013 Springer Science+Business Media Dordrecht.
Registro:
Documento: |
Artículo
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Título: | Intrinsic Feedbacks in MAPK Signaling Cascades Lead to Bistability and Oscillations |
Autor: | Sepulchre, J.-A.; Ventura, A.C. |
Filiación: | Institut Non Linéaire de Nice, UMR 7335 CNRS, University of Nice Sophia Antipolis, 1361 route des Lucioles, 06560 Valbonne, France Instituto de Fisiología, Biología Molecular y Neurociencias, CONICET, Buenos Aires, Argentina Departamento de Fisiología, Biología Molecular y Celular, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, Pabellón 2, 2 piso, C1428EHA Buenos Aires, Argentina
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Palabras clave: | MAPK; Retroactivity; Signaling cascade; biochemistry; feedback mechanism; protein; article; enzyme stability; phosphorylation; signal transduction; theoretical model; Enzyme Stability; MAP Kinase Signaling System; Models, Theoretical; Phosphorylation |
Año: | 2013
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Volumen: | 61
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Número: | 1
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Página de inicio: | 59
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Página de fin: | 78
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DOI: |
http://dx.doi.org/10.1007/s10441-013-9177-5 |
Título revista: | Acta Biotheoretica
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Título revista abreviado: | Acta Biotheor.
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ISSN: | 00015342
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CODEN: | ABIOA
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Registro: | https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_00015342_v61_n1_p59_Sepulchre |
Referencias:
- Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., (2001) Molecular biology of the cell, , Garland Science
- Angeli, D., Ferrell, J.E., Sontag, E.D., Detection of multistability, bifurcations, and hysteresis in a large class of biological positive-feedback systems (2004) Proc Natl Acad Sci USA, 101, p. 1822
- Bluthgen, N., Bruggeman, F.J., Legewie, S., Herzel, H., Westerhoff, H.V., Kholodenko, B.N., Detection of multi-stability, bifurcations, and hysteresis in a large class of biological positive-feedback systems (2006) FEBS J, 273, p. 895
- Del Vecchio, D., Ninfa, A.J., Sontag, E.D., Modular cell biology: retroactivity and insulation (2008) Mol Syst Biol, 4, p. 161
- Fages, F., Soliman, S., (2008) Lecture notes in computer science, 5054. , Springer, Berlin
- Feliu, E., Wiuf, C., Enzyme sharing as a cause of multi-stationarity in signaling systems (2012) J R Soc Interface, 9 (71), pp. 1224-1232
- Goldbeter, A., Koshland, J., An amplified sensitivity arising from covalent modification in biological systems (1981) Proc Natl Acad Sci USA, 78 (11), pp. 6840-6844. , DE
- Gonze, D., Goldbeter, A., A model for a network of phosphorylation-dephosphorylation cycles displaying the dynamics of dominoes and clocks (2001) J Theor Biol, 210, p. 167
- Gouzé, J., Positive and negative circuits in dynamical systems (1998) J Biol Syst, 6 (1), p. 11
- Gross, T., Feudel, U., Generalized models as an universal approach to the analysis of nonlinear dynamical systems (2006) Phys Rev E, 73, pp. 016205-016214
- Huang, C.Y., Ferrell, J., Ultrasensitivity in themitogen-activated protein kinase cascade (1996) Proc Natl Acad Sci USA, 93 (19), pp. 10078-10083. , JE
- Jiang, P., Ventura, A.C., Sontag, E.D., Merajver, S.D., Ninfa, A.J., Del Vecchio, D., Load-induced modulation of signal transduction networks (2011) Sci Signal, 4 (194), pp. 1-10
- Kholodenko, B., Negative feedback and ultrasensitivity can bring about oscillations in the mitogen-activated protein kinase cascades (2000) Eur J Biochem, 267, p. 1583
- Kim, Y., Paroush, Z., Nairz, K., Hafen, E., Jimenez, G., Shvartsman, S.Y., Substrate-dependent control of mapk phosphorylation in vivo (2011) Mol Syst Biol, 7, p. 467
- Markevich, N.I., Hoek, J.B., Kholodenko, B.N., Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades (2004) J Cell Biol, 164, p. 353
- Murray, J., (2002) Mathematical Biology I: An Introduction, , 3rd edn., Berlin: Springer
- Murray, A.W., Kirschner, M.W., Dominoes and clocks: the union of two views of the cell cycle (1989) Science, 246, p. 614
- Ortega, F., Acerenza, L., Westerhoff, H.V., Mas, F., Cascante, M., Product dependence and bifunctionality compromise the ultrasensitivity of signal transduction cascades (2002) Proc Natl Acad Sci USA, 99, p. 1170
- Ortega, F., Garces, J.L., Mas, F., Kholodenko, B.N., Cascante, M., Bistability from double phosphorylation in signal transduction. Kinetic and structural requirements (2006) FEBS J., 273, p. 3915
- Ossareh, H.R., Ventura, A.C., Merajver, S.D., Del Vecchio, D., Long signaling cascades tend to attenuate retroactivity (2011) Biophys J, 100 (7), p. 1617
- Qiao, L., Nachbar, R.B., Kevrekidis, I.G., Shvartsman, S.Y., Bistability and oscillations in the huang-ferrell model of mapk signaling (2007) PLoS Comput Biol, 3 (9), p. 1819
- Snoussi, E., Thomas, R., Logical identification of all steady states: the concept of feedback loop characterisitic states (1993) Bull Math Biol, 55 (5), p. 973
- Thalhauser, C., Komarova, N., Signal response sensitivity in the yeast mitogen-activated protein kinase cascade (2010) PLoS One, 5 (7). , doi: 10. 1371/journal. pone. 0011568
- Thattai, M., van Oudenaarden, A., At- tenuation of noise in ultrasensitive signaling cascades (2002) Biophys J, 82, p. 2943
- Thomas, R., D'Ari, R., (1990) Biological Feedback, , Boca Raton: CRC Press
- Ventura, A.C., Sepulchre, J.A., Merajver, S.D., A hidden feedback in signaling cascades is revealed (2008) PLoS Comput Biol, 4 (3), pp. e1000041
- Ventura, A., Jackson, T., Merajver, S., On the role of cell signaling models in cancer research (2009) Cancer Res., 69, p. 400
- Ventura, A.C., Jiang, P., van Wassenhove, L., Del Vecchio, D., Merajver, S.D., Ninfa, A.J., Signaling properties of a covalent modification cycle are altered by a downstream target (2010) Proc Natl Acad Sci USA, 107 (22), pp. 10032-10037
- Wagner, E., Nebreda, A., Signal integration by jnk and p38 mapk pathways in cancer development (2009) Nat Rev Cancer, 9, p. 537
- Wynn, M.L., Ventura, A.C., Sepulchre, J.A., Garcia, H.J., Merajver, S.D., Kinase inhibitors can produce off-target effects and activate linked pathways by retroactivity (2011) BMC Syst Biol, 5, p. 156
- Zumsande, M., Gross, T., Bifurcations and chaos in the mapk signaling cascade (2010) J Theor Biol, 265, p. 481
Citas:
---------- APA ----------
Sepulchre, J.-A. & Ventura, A.C.
(2013)
. Intrinsic Feedbacks in MAPK Signaling Cascades Lead to Bistability and Oscillations. Acta Biotheoretica, 61(1), 59-78.
http://dx.doi.org/10.1007/s10441-013-9177-5---------- CHICAGO ----------
Sepulchre, J.-A., Ventura, A.C.
"Intrinsic Feedbacks in MAPK Signaling Cascades Lead to Bistability and Oscillations"
. Acta Biotheoretica 61, no. 1
(2013) : 59-78.
http://dx.doi.org/10.1007/s10441-013-9177-5---------- MLA ----------
Sepulchre, J.-A., Ventura, A.C.
"Intrinsic Feedbacks in MAPK Signaling Cascades Lead to Bistability and Oscillations"
. Acta Biotheoretica, vol. 61, no. 1, 2013, pp. 59-78.
http://dx.doi.org/10.1007/s10441-013-9177-5---------- VANCOUVER ----------
Sepulchre, J.-A., Ventura, A.C. Intrinsic Feedbacks in MAPK Signaling Cascades Lead to Bistability and Oscillations. Acta Biotheor. 2013;61(1):59-78.
http://dx.doi.org/10.1007/s10441-013-9177-5